Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100242188   pentatricopeptide repeat-containing protein At5g39680 
 vvi-r.5   100242188   pentatricopeptide repeat-containing protein At5g39680 
 gma-u.5   100783779   pentatricopeptide repeat-containing protein At5g39680 
 mtr-u.5   11422995   pentatricopeptide repeat-containing protein At5g39680 
 sly-u.5   101256942   pentatricopeptide repeat-containing protein At5g39680 
 osa-u.5   4339672   pentatricopeptide repeat-containing protein At5g39680 
 zma-u.5   103630757   pentatricopeptide repeat-containing protein At5g39680 

close


Top 50 coexpressed genes to 100242188 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100242188 (vvi-u.5 coexpression data)

CoexMap"100242188"


vviLOC100242188 | Entrez gene ID : 100242188    
Species vvi gma mtr sly osa zma hvu bna cit bra ghi ppo sbi bdi ath nta tae cre sot
Paralog 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (811 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002265258.1 [sequence] [blastp]
XP_010654801.1 [sequence] [blastp]
XP_019077539.1 [sequence] [blastp]
XP_059595530.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 2,  nucl 1,  mito 1  (predict for XP_002265258.1)
cyto 6,  chlo 2,  nucl 1,  mito 1  (predict for XP_010654801.1)
cyto 6,  chlo 2,  nucl 1,  mito 1  (predict for XP_019077539.1)
cyto 6,  chlo 2,  nucl 1,  mito 1  (predict for XP_059595530.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for XP_002265258.1)
other 4,  mito 3  (predict for XP_010654801.1)
other 4,  mito 3  (predict for XP_019077539.1)
other 4,  mito 3  (predict for XP_059595530.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100242188
vvi-r.5
for
100242188
gma-u.5
for
100783779
mtr-u.5
for
11422995
sly-u.5
for
101256942
osa-u.5
for
4339672
zma-u.5
for
103630757


Ortholog ID: 9705
Species vvi gma bra bra mtr ghi cit sly sot nta nta osa zma hvu bdi
Symbol LOC100242188 LOC100783779 LOC103864216 LOC103850148 LOC11422995 LOC107911811 LOC102617103 LOC101256942 LOC102588774 LOC107819294 LOC107793836 LOC4339672 LOC103630757 LOC123451170 LOC100845678
Function* pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680-like pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680-like pentatricopeptide repeat-containing protein At5g39680
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03030 DNA replication 3
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu03410 Base excision repair 2
hvu03420 Nucleotide excision repair 2
hvu03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100242188 100783779 103864216 103850148 11422995 107911811 102617103 101256942 102588774 107819294 107793836 4339672 103630757 123451170 100845678
The preparation time of this page was 0.1 [sec].