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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100242427   pentatricopeptide repeat-containing protein At5g65570 
 vvi-r.5   100242427   pentatricopeptide repeat-containing protein At5g65570 
 ath-u.5   AT5G65570   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100798964   pentatricopeptide repeat-containing protein At5g65570 
 bra-r.6   103873994   pentatricopeptide repeat-containing protein At5g65570 
 mtr-u.5   11426265   pentatricopeptide repeat-containing protein At5g65570 
 mtr-u.5   25494728   pentatricopeptide repeat-containing protein At5g65570-like 
 bna-r.1   106431888   pentatricopeptide repeat-containing protein At5g65570 
 bna-r.1   106436818   pentatricopeptide repeat-containing protein At5g65570 

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Top 50 coexpressed genes to 100242427 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100242427 (vvi-u.5 coexpression data)

CoexMap"100242427"


vviLOC100242427 | Entrez gene ID : 100242427    
Species vvi ath gma bra mtr bna osa nta bdi sot cit ppo tae sly zma hvu sbi cre ghi
Paralog 2 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (811 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_010646445.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  E.R. 2,  nucl 1,  plas 1,  nucl_plas 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_010646445.3)
Subcellular
localization
TargetP
other 6  (predict for XP_010646445.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100242427
vvi-r.5
for
100242427
ath-u.5
for
AT5G65570
gma-u.5
for
100798964
bra-r.6
for
103873994
mtr-u.5
for
11426265
mtr-u.5
for
25494728
bna-r.1
for
106431888
bna-r.1
for
106436818


Ortholog ID: 16840
Species vvi ath gma bra mtr mtr bna bna
Symbol LOC100242427 AT5G65570 LOC100798964 LOC103873994 LOC11426265 LOC25494728 LOC106431888 LOC106436818
Function* pentatricopeptide repeat-containing protein At5g65570 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g65570 pentatricopeptide repeat-containing protein At5g65570 pentatricopeptide repeat-containing protein At5g65570 pentatricopeptide repeat-containing protein At5g65570-like pentatricopeptide repeat-containing protein At5g65570 pentatricopeptide repeat-containing protein At5g65570
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100242427 836683 100798964 103873994 11426265 25494728 106431888 106436818
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