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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100242430   putative E3 ubiquitin-protein ligase LIN-1 
 vvi-r.5   100242430   putative E3 ubiquitin-protein ligase LIN-1 
 vvi-m.5   100242430   putative E3 ubiquitin-protein ligase LIN-1 
 gma-u.5   100787950   putative E3 ubiquitin-protein ligase LIN-1 
 mtr-u.5   25502268   putative E3 ubiquitin-protein ligase LIN-1 
 sly-u.5   101248590   putative E3 ubiquitin-protein ligase LIN-1 
 osa-u.5   4325882   putative E3 ubiquitin-protein ligase LIN 
 zma-u.5   103651710   putative E3 ubiquitin-protein ligase LIN 

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Top 50 coexpressed genes to 100242430 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100242430 (vvi-u.5 coexpression data)

CoexMap"100242430"


vviLOC100242430 | Entrez gene ID : 100242430    
Species vvi gma mtr sly osa zma bdi hvu bra cit bna ath ppo sbi ghi sot nta cre tae
Paralog 3 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (272 genes)  IEA  
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (280 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_010656297.1 [sequence] [blastp]
XP_010656298.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 2,  chlo 2,  E.R. 2,  cysk_nucl 1,  cyto 1,  mito 1,  extr 1,  vacu 1  (predict for XP_010656297.1)
nucl 2,  chlo 2,  cysk_nucl 1,  plas 1,  E.R. 1,  chlo_mito 1,  E.R._plas 1  (predict for XP_010656298.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_010656297.1)
chlo 8  (predict for XP_010656298.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100242430
vvi-r.5
for
100242430
vvi-m.5
for
100242430
gma-u.5
for
100787950
mtr-u.5
for
25502268
sly-u.5
for
101248590
osa-u.5
for
4325882
zma-u.5
for
103651710


Ortholog ID: 12775
Species vvi gma mtr ghi sly sot nta nta osa zma hvu sbi bdi
Symbol LOC100242430 LOC100787950 LOC25502268 LOC107907198 LOC101248590 LOC102605913 LOC107787896 LOC107796870 LOC4325882 LOC103651710 LOC123439681 LOC8077569 LOC100836629
Function* putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 4
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
sly00940 Phenylpropanoid biosynthesis 2
sly00941 Flavonoid biosynthesis 2
sly00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00480 Glutathione metabolism 6
sot00270 Cysteine and methionine metabolism 2
sot00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
hvu00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00940 Phenylpropanoid biosynthesis 3
bdi00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100242430 100787950 25502268 107907198 101248590 102605913 107787896 107796870 4325882 103651710 123439681 8077569 100836629
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