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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100242638   uncharacterized LOC100242638 
 vvi-r.5   100242638   uncharacterized LOC100242638 
 vvi-m.5   100242638   uncharacterized LOC100242638 
 ath-u.5   AT2G26210   Ankyrin repeat family protein 
 gma-u.5   100814367   ankyrin repeat-containing protein 
 gma-u.5   100804827   hepatocyte growth factor-regulated tyrosine kinase substrate 
 bra-r.6   103864721   protein phosphatase 1 regulatory subunit 12A 
 ppo-u.5   7492275   uncharacterized LOC7492275 
 ppo-u.5   7463778   vacuolar protein sorting-associated protein 27 
 mtr-u.5   11423859   vacuolar protein sorting-associated protein 27 
 ghi-r.1   121204785   uncharacterized LOC121204785 
 ghi-r.1   107932882   hepatocyte growth factor-regulated tyrosine kinase substrate 
 bna-r.1   106446790   protein phosphatase 1 regulatory subunit 12A 
 bna-r.1   106397492   palmitoyltransferase AKR1-like 
 cit-r.1   102630137   uncharacterized LOC102630137 
 sly-u.5   101253493   uncharacterized LOC101253493 
 sot-r.1   102599126   vacuolar protein sorting-associated protein 27 
 nta-r.1   107759019   uncharacterized LOC107759019 
 nta-r.1   107782797   uncharacterized LOC107782797 
 osa-u.5   4343920   vacuolar protein sorting-associated protein 27 
 zma-u.5   100281249   FYVE zinc finger family protein 
 tae-r.2   123187933   vacuolar protein sorting-associated protein 27 
 tae-r.2   123052071   vacuolar protein sorting-associated protein 27 
 tae-r.2   123044195   vacuolar protein sorting-associated protein 27 
 hvu-r.1   123425283   vacuolar protein sorting-associated protein 27 
 sbi-r.1   8060691   ankyrin repeat domain-containing protein 54 
 bdi-r.1   100844046   vacuolar protein sorting-associated protein 27 

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Top 50 coexpressed genes to 100242638 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100242638 (vvi-u.5 coexpression data)

CoexMap"100242638"


vviLOC100242638 | Entrez gene ID : 100242638      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 1 2 1 2 2 1 1 1 2 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006623 [list] [network] protein targeting to vacuole  (12 genes)  IEA  
GO:0043328 [list] [network] protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway  (13 genes)  IEA  
GO CC
GO:0033565 [list] [network] ESCRT-0 complex  (1 genes)  IEA  
GO MF
GO:0032266 [list] [network] phosphatidylinositol-3-phosphate binding  (8 genes)  IEA  
GO:0043130 [list] [network] ubiquitin binding  (50 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (2138 genes)  IEA  
Protein XP_002268154.1 [sequence] [blastp]
XP_010653064.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_002268154.1)
nucl 6,  chlo 1,  cysk 1,  cyto 1,  plas 1,  chlo_mito 1,  cyto_plas 1  (predict for XP_010653064.1)
Subcellular
localization
TargetP
chlo 7,  other 4  (predict for XP_002268154.1)
other 4  (predict for XP_010653064.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100242638
vvi-r.5
for
100242638
vvi-m.5
for
100242638
ath-u.5
for
AT2G26210
gma-u.5
for
100814367
gma-u.5
for
100804827
bra-r.6
for
103864721
ppo-u.5
for
7492275
ppo-u.5
for
7463778
mtr-u.5
for
11423859
ghi-r.1
for
121204785
ghi-r.1
for
107932882
bna-r.1
for
106446790
bna-r.1
for
106397492
cit-r.1
for
102630137
sly-u.5
for
101253493
sot-r.1
for
102599126
nta-r.1
for
107759019
nta-r.1
for
107782797
osa-u.5
for
4343920
zma-u.5
for
100281249
tae-r.2
for
123187933
tae-r.2
for
123052071
tae-r.2
for
123044195
hvu-r.1
for
123425283
sbi-r.1
for
8060691
bdi-r.1
for
100844046


Ortholog ID: 10002
Species vvi ath gma gma bra ppo ppo mtr ghi ghi bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC100242638 AT2G26210 LOC100814367 LOC100804827 LOC103864721 LOC7492275 LOC7463778 LOC11423859 LOC121204785 LOC107932882 LOC106446790 LOC106397492 LOC102630137 LOC101253493 LOC102599126 LOC107759019 LOC107782797 LOC4343920 LOC100281249 LOC123187933 LOC123052071 LOC123044195 LOC123425283 LOC8060691 LOC100844046
Function* uncharacterized LOC100242638 Ankyrin repeat family protein ankyrin repeat-containing protein hepatocyte growth factor-regulated tyrosine kinase substrate protein phosphatase 1 regulatory subunit 12A uncharacterized LOC7492275 vacuolar protein sorting-associated protein 27 vacuolar protein sorting-associated protein 27 uncharacterized LOC121204785 hepatocyte growth factor-regulated tyrosine kinase substrate protein phosphatase 1 regulatory subunit 12A palmitoyltransferase AKR1-like uncharacterized LOC102630137 uncharacterized LOC101253493 vacuolar protein sorting-associated protein 27 uncharacterized LOC107759019 uncharacterized LOC107782797 vacuolar protein sorting-associated protein 27 FYVE zinc finger family protein vacuolar protein sorting-associated protein 27 vacuolar protein sorting-associated protein 27 vacuolar protein sorting-associated protein 27 vacuolar protein sorting-associated protein 27 ankyrin repeat domain-containing protein 54 vacuolar protein sorting-associated protein 27
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 3
vvi04130 SNARE interactions in vesicular transport 2
vvi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath00600 Sphingolipid metabolism 2
ath04382 Cornified envelope formation 2
ath03083 Polycomb repressive complex 2
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 5
gma04145 Phagosome 5
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
gma04142 Lysosome 2
gma04145 Phagosome 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
bra04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 5
ppo00010 Glycolysis / Gluconeogenesis 5
ppo00710 Carbon fixation by Calvin cycle 4
ppo01230 Biosynthesis of amino acids 4
ppo00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
ppo03050 Proteasome 3
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 3
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna00270 Cysteine and methionine metabolism 2
bna04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna03082 ATP-dependent chromatin remodeling 3
bna03250 Viral life cycle - HIV-1 3
bna00270 Cysteine and methionine metabolism 2
bna04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00330 Arginine and proline metabolism 3
tae00020 Citrate cycle (TCA cycle) 2
tae00630 Glyoxylate and dicarboxylate metabolism 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 6
sbi04145 Phagosome 5
sbi04142 Lysosome 4
sbi04144 Endocytosis 2
sbi03050 Proteasome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100242638 817161 100814367 100804827 103864721 7492275 7463778 11423859 121204785 107932882 106446790 106397492 102630137 101253493 102599126 107759019 107782797 4343920 100281249 123187933 123052071 123044195 123425283 8060691 100844046
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