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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5  100243562  F-box protein At1g30790 
 vvi-r.5  100243562  F-box protein At1g30790 
 vvi-m.5  100243562  F-box protein At1g30790 
 vvi-u.5  104877768  putative F-box protein At1g32420 
 ath-u.5  AT3G20620  F-box family protein-like protein 
 bra-r.6  103869301  F-box protein At5g07610 
 ghi-r.1  107903493  F-box protein At5g49610 
 ghi-r.1  107939643  F-box protein At5g49610 

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Top 50 coexpressed genes to 100243562 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100243562 (vvi-u.5 coexpression data)

CoexMap"100243562"


vviLOC100243562 | Entrez gene ID : 100243562
Species vvi ath bra ghi hvu sot bdi sly nta osa tae bna ppo zma cre mtr sbi gma cit
Paralog 4 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_010644347.1 [sequence] [blastp]
XP_010644350.1 [sequence] [blastp]
XP_010644351.1 [sequence] [blastp]
XP_010644352.1 [sequence] [blastp]
XP_019072439.1 [sequence] [blastp]
XP_059591420.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  extr 2,  nucl_plas 2,  cyto 1  (predict for XP_010644347.1)
nucl 4,  extr 2,  nucl_plas 2,  cyto 1  (predict for XP_010644350.1)
nucl 4,  extr 2,  nucl_plas 2,  cyto 1  (predict for XP_010644351.1)
nucl 4,  extr 2,  nucl_plas 2,  cyto 1  (predict for XP_010644352.1)
nucl 4,  extr 3,  cyto 1,  chlo 1,  cysk 1,  golg 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_019072439.1)
nucl 4,  extr 2,  nucl_plas 2,  cyto 1  (predict for XP_059591420.1)
Subcellular
localization
TargetP
other 8  (predict for XP_010644347.1)
other 8  (predict for XP_010644350.1)
other 8  (predict for XP_010644351.1)
other 8  (predict for XP_010644352.1)
other 8  (predict for XP_019072439.1)
other 8  (predict for XP_059591420.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

vvi-u.5
for
100243562


vvi-r.5
for
100243562


vvi-m.5
for
100243562


vvi-u.5
for
104877768


ath-u.5
for
AT3G20620


bra-r.6
for
103869301


ghi-r.1
for
107903493


ghi-r.1
for
107939643



Ortholog ID: 10103
Species vvi vvi ath bra bra ghi ghi bna bna bna
Symbol LOC100243562 LOC100854679 AT3G20620 LOC103869301 LOC117128279 LOC107903493 LOC107939643 LOC106431328 LOC106377593 LOC125608841
Function* F-box protein At1g30790 putative F-box protein At4g10190 F-box family protein-like protein F-box protein At5g07610 F-box protein At5g07610-like F-box protein At5g49610 F-box protein At5g49610 putative F-box protein At2g02030 putative F-box protein At2g02030 F-box protein At5g07610-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
ath04382 Cornified envelope formation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100243562 100854679 821609 103869301 117128279 107903493 107939643 106431328 106377593 125608841
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