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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5  100243896  uncharacterized LOC100243896 
 vvi-r.5  100243896  uncharacterized LOC100243896 
 gma-u.5  100818757  U4/U6 small nuclear ribonucleoprotein PRP4 
 gma-u.5  100820412  uncharacterized LOC100820412 
 ppo-u.5  7495956  probable E3 ubiquitin ligase complex SCF subunit sconB 
 mtr-u.5  25495284  WD repeat-containing protein 38 
 ghi-r.1  107892367  uncharacterized WD repeat-containing protein alr3466 
 ghi-r.1  107892773  TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L 
 cit-r.1  102623264  uncharacterized LOC102623264 
 sly-u.5  101259012  mitochondrial division protein 1 
 sot-r.1  102593518  uncharacterized WD repeat-containing protein alr3466-like 
 nta-r.1  107774392  uncharacterized LOC107774392 
 nta-r.1  107759590  uncharacterized LOC107759590 
 osa-u.5  4325655  uncharacterized LOC4325655 
 zma-u.5  100275548  uncharacterized LOC100275548 
 tae-r.2  123077473  nuclear distribution protein nudF 
 tae-r.2  123068939  ribosome assembly protein 4 
 tae-r.2  123060405  guanine nucleotide-binding protein subunit beta-like protein 
 hvu-r.1  123442925  ribosome assembly protein 4-like 
 sbi-r.1  8084370  katanin p80 WD40 repeat-containing subunit B1 
 bdi-r.1  100833471  guanine nucleotide-binding protein subunit beta-like protein 

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Top 50 coexpressed genes to 100243896 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100243896 (vvi-u.5 coexpression data)

CoexMap"100243896"


vviLOC100243896 | Entrez gene ID : 100243896
Species vvi gma ppo mtr ghi cit sly sot nta osa zma tae hvu sbi bdi bra bna cre ath
Paralog 2 2 1 1 2 1 1 1 2 1 1 3 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_010661027.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 4,  cyto 1,  vacu 1,  cysk 1  (predict for XP_010661027.1)
Subcellular
localization
TargetP
other 9  (predict for XP_010661027.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

vvi-u.5
for
100243896


vvi-r.5
for
100243896


gma-u.5
for
100818757


gma-u.5
for
100820412


ppo-u.5
for
7495956


mtr-u.5
for
25495284


ghi-r.1
for
107892367


ghi-r.1
for
107892773


cit-r.1
for
102623264


sly-u.5
for
101259012


sot-r.1
for
102593518


nta-r.1
for
107774392


nta-r.1
for
107759590


osa-u.5
for
4325655


zma-u.5
for
100275548


tae-r.2
for
123077473


tae-r.2
for
123068939


tae-r.2
for
123060405


hvu-r.1
for
123442925


sbi-r.1
for
8084370


bdi-r.1
for
100833471



Ortholog ID: 11580
Species vvi gma gma ppo mtr ghi cit sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC100243896 LOC100818757 LOC100820412 LOC7495956 LOC25495284 LOC107892773 LOC102623264 LOC101259012 LOC102593518 LOC107774392 LOC107759590 LOC4325655 LOC100275548 LOC123077473 LOC123068939 LOC123060405 LOC123442925 LOC8084370 LOC100833471
Function* uncharacterized LOC100243896 U4/U6 small nuclear ribonucleoprotein PRP4 uncharacterized LOC100820412 probable E3 ubiquitin ligase complex SCF subunit sconB WD repeat-containing protein 38 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L uncharacterized LOC102623264 mitochondrial division protein 1 uncharacterized WD repeat-containing protein alr3466-like uncharacterized LOC107774392 uncharacterized LOC107759590 uncharacterized LOC4325655 uncharacterized LOC100275548 nuclear distribution protein nudF ribosome assembly protein 4 guanine nucleotide-binding protein subunit beta-like protein ribosome assembly protein 4-like katanin p80 WD40 repeat-containing subunit B1 guanine nucleotide-binding protein subunit beta-like protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu04142 Lysosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100243896 100818757 100820412 7495956 25495284 107892773 102623264 101259012 102593518 107774392 107759590 4325655 100275548 123077473 123068939 123060405 123442925 8084370 100833471
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