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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100245386   uncharacterized LOC100245386 
 vvi-r.5   100245386   uncharacterized LOC100245386 
 vvi-m.5   100245386   uncharacterized LOC100245386 
 ath-u.5   AT1G62780   dimethylallyl, adenosine tRNA methylthiotransferase 
 gma-u.5   100775621   uncharacterized LOC100775621 
 ppo-u.5   18094390   uncharacterized LOC18094390 
 mtr-u.5   11436298   uncharacterized LOC11436298 
 sly-u.5   101243917   uncharacterized LOC101243917 
 osa-u.5   4334910   uncharacterized LOC4334910 
 zma-u.5   103631959   uncharacterized LOC103631959 

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Top 50 coexpressed genes to 100245386 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100245386 (vvi-u.5 coexpression data)

CoexMap"100245386"


vviLOC100245386 | Entrez gene ID : 100245386      
Species vvi ath gma ppo mtr sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009570 [list] [network] chloroplast stroma  (103 genes)  IEA  
GO MF
Protein XP_002264554.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1,  extr 1  (predict for XP_002264554.2)
Subcellular
localization
TargetP
chlo 8  (predict for XP_002264554.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100245386

.
vvi-r.5
for
100245386

.
vvi-m.5
for
100245386

.
ath-u.5
for
AT1G62780

.
gma-u.5
for
100775621

.
ppo-u.5
for
18094390

.
mtr-u.5
for
11436298

.
sly-u.5
for
101243917

.
osa-u.5
for
4334910

.
zma-u.5
for
103631959

.


Ortholog ID: 11102
Species ath gma sly osa zma bra vvi ppo mtr tae tae ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G62780 LOC100775621 LOC101243917 LOC4334910 LOC103631959 LOC103838366 LOC100245386 LOC18094390 LOC11436298 LOC123130165 LOC123043248 LOC107923021 LOC107904508 BNAA09G12720D BNACNNG68480D CHLRE_13g579550v5 LOC8086433 LOC102585177 LOC102625163 LOC100822708 LOC107801093 LOC107808286
Function* dimethylallyl, adenosine tRNA methylthiotransferase uncharacterized LOC100775621 uncharacterized LOC101243917 uncharacterized LOC4334910 uncharacterized LOC103631959 uncharacterized LOC103838366 uncharacterized LOC100245386 uncharacterized LOC18094390 uncharacterized LOC11436298 uncharacterized LOC123130165 uncharacterized LOC123043248 uncharacterized LOC107923021 uncharacterized LOC107904508 uncharacterized BNAA09G12720D uncharacterized BNACNNG68480D uncharacterized protein uncharacterized LOC8086433 uncharacterized LOC102585177 uncharacterized LOC102625163 uncharacterized LOC100822708 uncharacterized LOC107801093 uncharacterized LOC107808286
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 4
vvi03010 Ribosome 4
vvi00710 Carbon fixation by Calvin cycle 3
vvi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
tae03015 mRNA surveillance pathway 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00450 Selenocompound metabolism 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00450 Selenocompound metabolism 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
cre01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842577 100775621 101243917 4334910 103631959 103838366 100245386 18094390 11436298 123130165 123043248 107923021 107904508 106366545 106402158 5719298 8086433 102585177 102625163 100822708 107801093 107808286
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