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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100245717   large ribosomal subunit protein bL21m 
 vvi-r.5   100245717   large ribosomal subunit protein bL21m 
 vvi-u.5   100255002   large ribosomal subunit protein bL21c 
 ath-u.5   NFD1   Ribosomal protein L21 
 ath-u.5   RPL21C   Ribosomal protein L21 
 gma-u.5   100780480   50S ribosomal protein L21, mitochondrial 
 gma-u.5   100781947   50S ribosomal protein L21, mitochondrial 
 gma-u.5   100795152   putative 50S ribosomal protein L21, chloroplastic 
 bra-r.6   103852238   50S ribosomal protein L21, mitochondrial 
 bra-r.6   103862013   50S ribosomal protein L21, mitochondrial 
 bra-r.6   103833583   50S ribosomal protein L21, chloroplastic 
 ppo-u.5   7467422   50S ribosomal protein L21, chloroplastic 
 ppo-u.5   7463126   50S ribosomal protein L21, mitochondrial 
 ppo-u.5   18104457   50S ribosomal protein L21, chloroplastic 
 mtr-u.5   25484971   50S ribosomal protein L21, chloroplastic 
 mtr-u.5   11429582   50S ribosomal protein L21, mitochondrial 
 ghi-r.1   107913971   50S ribosomal protein L21, mitochondrial 
 ghi-r.1   107957477   50S ribosomal protein L21, chloroplastic 
 ghi-r.1   107904880   50S ribosomal protein L21, chloroplastic 
 bna-r.1   106415951   50S ribosomal protein L21, chloroplastic 
 bna-r.1   106375980   50S ribosomal protein L21, mitochondrial 
 bna-r.1   106352926   50S ribosomal protein L21, mitochondrial 
 cit-r.1   102626544   50S ribosomal protein L21, mitochondrial 
 cit-r.1   102624292   50S ribosomal protein L21, chloroplastic 
 sly-u.5   101250811   large ribosomal subunit protein bL21c 
 sly-u.5   101250359   large ribosomal subunit protein bL21m 
 sot-r.1   102595243   50S ribosomal protein L21, chloroplastic 
 sot-r.1   102590994   50S ribosomal protein L21, mitochondrial 
 nta-r.1   107780584   large ribosomal subunit protein bL21m-like 
 nta-r.1   107817464   large ribosomal subunit protein bL21m-like 
 nta-r.1   107781915   large ribosomal subunit protein bL21c 
 osa-u.5   4328932   large ribosomal subunit protein bL21c 
 osa-u.5   4339580   large ribosomal subunit protein bL21m 
 zma-u.5   100194267   50S ribosomal protein L21p, mitochondrial-like 
 zma-u.5   100272779   50S ribosomal protein L21-like 
 zma-u.5   100280871   50S ribosomal protein L21, chloroplastic-like 
 tae-r.2   123067621   50S ribosomal protein L21, mitochondrial 
 tae-r.2   123183029   50S ribosomal protein L21, mitochondrial 
 tae-r.2   123145181   50S ribosomal protein L21, mitochondrial 
 hvu-r.1   123449844   50S ribosomal protein L21, mitochondrial-like 
 hvu-r.1   123402487   50S ribosomal protein L21, chloroplastic 
 sbi-r.1   8074578   50S ribosomal protein L21, mitochondrial 
 sbi-r.1   8059054   50S ribosomal protein L21, chloroplastic 
 bdi-r.1   100829900   50S ribosomal protein L21, mitochondrial 
 bdi-r.1   100839612   50S ribosomal protein L21, chloroplastic 
 cre-r.1   CHLRE_06g299000v5   uncharacterized protein 
 cre-r.1   CHLRE_09g388550v5   uncharacterized protein 

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Top 50 coexpressed genes to 100245717 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100245717 (vvi-u.5 coexpression data)

CoexMap"100245717"


vviLOC100245717 | Entrez gene ID : 100245717    
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 3 3 3 2 3 3 2 2 2 3 2 3 3 2 2 2 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi03010 [list] [network] Ribosome (544 genes)
GO BP
GO:0006412 [list] [network] translation  (410 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (293 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (288 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
Protein XP_059596044.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3  (predict for XP_059596044.1)
Subcellular
localization
TargetP
mito 6,  chlo 5  (predict for XP_059596044.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100245717
vvi-r.5
for
100245717
vvi-u.5
for
100255002
ath-u.5
for
NFD1
ath-u.5
for
RPL21C
gma-u.5
for
100780480
gma-u.5
for
100781947
gma-u.5
for
100795152
bra-r.6
for
103852238
bra-r.6
for
103862013
bra-r.6
for
103833583
ppo-u.5
for
7467422
ppo-u.5
for
7463126
ppo-u.5
for
18104457
mtr-u.5
for
25484971
mtr-u.5
for
11429582
ghi-r.1
for
107913971
ghi-r.1
for
107957477
ghi-r.1
for
107904880
bna-r.1
for
106415951
bna-r.1
for
106375980
bna-r.1
for
106352926
cit-r.1
for
102626544
cit-r.1
for
102624292
sly-u.5
for
101250811
sly-u.5
for
101250359
sot-r.1
for
102595243
sot-r.1
for
102590994
nta-r.1
for
107780584
nta-r.1
for
107817464
nta-r.1
for
107781915
osa-u.5
for
4328932
osa-u.5
for
4339580
zma-u.5
for
100194267
zma-u.5
for
100272779
zma-u.5
for
100280871
tae-r.2
for
123067621
tae-r.2
for
123183029
tae-r.2
for
123145181
hvu-r.1
for
123449844
hvu-r.1
for
123402487
sbi-r.1
for
8074578
sbi-r.1
for
8059054
bdi-r.1
for
100829900
bdi-r.1
for
100839612
cre-r.1
for
CHLRE_06g299000v5
cre-r.1
for
CHLRE_09g388550v5


Ortholog ID: 2291
Species vvi vvi ath ath gma gma gma bra bra bra ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna cit cit sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre cre
Symbol LOC100245717 LOC100255002 NFD1 RPL21C LOC100780480 LOC100781947 LOC100795152 LOC103852238 LOC103833583 LOC103834649 LOC7467422 LOC7463126 LOC18104457 LOC25484971 LOC11429582 LOC107904880 LOC107901818 LOC107895347 LOC106375980 LOC106352926 LOC106418962 LOC102626544 LOC102624292 LOC101250811 LOC101250359 LOC102595243 LOC102590994 LOC107781915 LOC107794729 LOC107830548 LOC4328932 LOC4339580 LOC100272779 LOC100280871 LOC100285347 LOC123183029 LOC123127406 LOC123137054 LOC123449844 LOC123402487 LOC8074578 LOC8059054 LOC100829900 LOC100839612 CHLRE_06g299000v5 CHLRE_09g388550v5
Function* large ribosomal subunit protein bL21m large ribosomal subunit protein bL21c Ribosomal protein L21 Ribosomal protein L21 50S ribosomal protein L21, mitochondrial 50S ribosomal protein L21, mitochondrial putative 50S ribosomal protein L21, chloroplastic 50S ribosomal protein L21, mitochondrial 50S ribosomal protein L21, chloroplastic 50S ribosomal protein L21, mitochondrial 50S ribosomal protein L21, chloroplastic 50S ribosomal protein L21, mitochondrial 50S ribosomal protein L21, chloroplastic 50S ribosomal protein L21, chloroplastic 50S ribosomal protein L21, mitochondrial 50S ribosomal protein L21, chloroplastic 50S ribosomal protein L21, mitochondrial 50S ribosomal protein L21, mitochondrial 50S ribosomal protein L21, mitochondrial 50S ribosomal protein L21, mitochondrial 50S ribosomal protein L21, chloroplastic 50S ribosomal protein L21, mitochondrial 50S ribosomal protein L21, chloroplastic large ribosomal subunit protein bL21c large ribosomal subunit protein bL21m 50S ribosomal protein L21, chloroplastic 50S ribosomal protein L21, mitochondrial large ribosomal subunit protein bL21c large ribosomal subunit protein bL21m-like large ribosomal subunit protein bL21c-like large ribosomal subunit protein bL21c large ribosomal subunit protein bL21m 50S ribosomal protein L21-like 50S ribosomal protein L21, chloroplastic-like 50S ribosomal protein L21, chloroplastic-like 50S ribosomal protein L21, mitochondrial 50S ribosomal protein L21, chloroplastic 50S ribosomal protein L21, chloroplastic 50S ribosomal protein L21, mitochondrial-like 50S ribosomal protein L21, chloroplastic 50S ribosomal protein L21, mitochondrial 50S ribosomal protein L21, chloroplastic 50S ribosomal protein L21, mitochondrial 50S ribosomal protein L21, chloroplastic uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
vvi00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra04626 Plant-pathogen interaction 3
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
ghi01240 Biosynthesis of cofactors 4
ghi00053 Ascorbate and aldarate metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 11
bna03030 DNA replication 2
bna03430 Mismatch repair 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 11
bna00030 Pentose phosphate pathway 2
bna00040 Pentose and glucuronate interconversions 2
bna00710 Carbon fixation by Calvin cycle 2
bna01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03010 Ribosome 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
nta00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 7
osa03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 13
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 8
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 9
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100245717 100255002 829217 840472 100780480 100781947 100795152 103852238 103833583 103834649 7467422 7463126 18104457 25484971 11429582 107904880 107901818 107895347 106375980 106352926 106418962 102626544 102624292 101250811 101250359 102595243 102590994 107781915 107794729 107830548 4328932 4339580 100272779 100280871 100285347 123183029 123127406 123137054 123449844 123402487 8074578 8059054 100829900 100839612 5717004 5720032
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