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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100246179   SCARECROW-LIKE protein 7 
 vvi-r.5   100246179   SCARECROW-LIKE protein 7 
 vvi-m.5   100246179   SCARECROW-LIKE protein 7 
 ath-u.5   AT3G50650   GRAS family transcription factor 
 ath-u.5   AT5G66770   GRAS family transcription factor 
 gma-u.5   100800989   scarecrow-like protein 4 
 gma-u.5   100792494   SCARECROW-LIKE protein 7 
 ppo-u.5   18099283   SCARECROW-LIKE protein 7 
 ppo-u.5   7473171   SCARECROW-LIKE protein 7 
 mtr-u.5   11446666   SCARECROW-LIKE protein 7 
 sly-u.5   101257128   SCARECROW-LIKE protein 7 
 osa-u.5   4333948   SCARECROW-LIKE protein 7-like 
 zma-u.5   103643942   SCARECROW-LIKE protein 7 
 zma-u.5   103625927   SCARECROW-LIKE protein 7 

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Top 50 coexpressed genes to 100246179 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100246179 (vvi-u.5 coexpression data)

CoexMap"100246179"


vviLOC100246179 | Entrez gene ID : 100246179      
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 2 2 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1359 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2597 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (598 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (925 genes)  IEA  
Protein XP_002267140.1 [sequence] [blastp]
XP_059592393.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  nucl_plas 3,  cyto 2,  chlo 1,  mito 1,  cysk 1,  golg 1,  chlo_mito 1  (predict for XP_002267140.1)
nucl 6,  cyto 1,  chlo 1,  plas 1,  golg 1,  golg_plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_059592393.1)
Subcellular
localization
TargetP
other 5  (predict for XP_002267140.1)
other 5  (predict for XP_059592393.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100246179
vvi-r.5
for
100246179
vvi-m.5
for
100246179
ath-u.5
for
AT3G50650
ath-u.5
for
AT5G66770
gma-u.5
for
100800989
gma-u.5
for
100792494
ppo-u.5
for
18099283
ppo-u.5
for
7473171
mtr-u.5
for
11446666
sly-u.5
for
101257128
osa-u.5
for
4333948
zma-u.5
for
103643942
zma-u.5
for
103625927


Ortholog ID: 8044
Species vvi ath ath gma gma bra ppo ppo mtr ghi ghi bna bna cit sly sot nta nta osa zma zma tae tae hvu sbi bdi
Symbol LOC100246179 AT3G50650 AT5G66770 LOC100792494 LOC100800989 LOC103829567 LOC7473171 LOC18099283 LOC11446666 LOC107909391 LOC107945747 LOC106358342 LOC106390362 LOC102624250 LOC101257128 LOC102604465 LOC107775207 LOC107777279 LOC4333948 LOC103643942 LOC103625927 LOC123095941 LOC123087050 LOC123447599 LOC8063355 LOC100831491
Function* SCARECROW-LIKE protein 7 GRAS family transcription factor GRAS family transcription factor SCARECROW-LIKE protein 7 scarecrow-like protein 4 scarecrow-like protein 4 SCARECROW-LIKE protein 7 SCARECROW-LIKE protein 7 SCARECROW-LIKE protein 7 SCARECROW-LIKE protein 7 SCARECROW-LIKE protein 7 scarecrow-like protein 4 scarecrow-like protein 4 SCARECROW-LIKE protein 7 SCARECROW-LIKE protein 7 scarecrow-like protein 4 SCARECROW-LIKE protein 7 SCARECROW-LIKE protein 7-like SCARECROW-LIKE protein 7-like SCARECROW-LIKE protein 7 SCARECROW-LIKE protein 7 SCARECROW-LIKE protein 7-like SCARECROW-LIKE protein 7 SCARECROW-LIKE protein 7 scarecrow-like protein 4 SCARECROW-LIKE protein 7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00010 Glycolysis / Gluconeogenesis 3
ppo00330 Arginine and proline metabolism 3
ppo00053 Ascorbate and aldarate metabolism 2
ppo00071 Fatty acid degradation 2
ppo00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00905 Brassinosteroid biosynthesis 3
ghi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
nta00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
nta00010 Glycolysis / Gluconeogenesis 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00380 Tryptophan metabolism 2
sbi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100246179 824228 836810 100792494 100800989 103829567 7473171 18099283 11446666 107909391 107945747 106358342 106390362 102624250 101257128 102604465 107775207 107777279 4333948 103643942 103625927 123095941 123087050 123447599 8063355 100831491
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