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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100248441   pentatricopeptide repeat-containing protein At2g22410, mitochondrial 
 vvi-r.5   100248441   pentatricopeptide repeat-containing protein At2g22410, mitochondrial 
 ath-u.5   SLO1   SLOW GROWTH 1 
 bra-r.6   103868580   pentatricopeptide repeat-containing protein At2g22410, mitochondrial 
 mtr-u.5   11434540   pentatricopeptide repeat-containing protein At2g22410, mitochondrial 
 ghi-r.1   107931758   pentatricopeptide repeat-containing protein At2g22410, mitochondrial 
 bna-r.1   125609526   pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like 
 bna-r.1   106353608   pentatricopeptide repeat-containing protein At2g22410, mitochondrial 
 cit-r.1   102621837   pentatricopeptide repeat-containing protein At2g22410, mitochondrial 
 sly-u.5   101255361   pentatricopeptide repeat-containing protein At2g22410, mitochondrial 
 sot-r.1   102598307   pentatricopeptide repeat-containing protein At2g22410, mitochondrial 
 nta-r.1   107785689   pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like 
 nta-r.1   107829016   pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like 
 osa-u.5   9272050   pentatricopeptide repeat-containing protein At2g22410, mitochondrial 
 zma-u.5   103626239   pentatricopeptide repeat-containing protein At2g22410, mitochondrial 
 tae-r.2   123158147   pentatricopeptide repeat-containing protein At2g22410, mitochondrial 
 hvu-r.1   123410508   pentatricopeptide repeat-containing protein At2g22410, mitochondrial 
 bdi-r.1   100833099   pentatricopeptide repeat-containing protein At2g22410, mitochondrial 

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Top 50 coexpressed genes to 100248441 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100248441 (vvi-u.5 coexpression data)

CoexMap"100248441"


vviLOC100248441 | Entrez gene ID : 100248441      
Species vvi ath bra mtr ghi bna cit sly sot nta osa zma tae hvu bdi gma cre ppo sbi
Paralog 2 1 1 1 1 2 1 1 1 2 1 1 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_010651252.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for XP_010651252.2)
Subcellular
localization
TargetP
mito 8,  chlo 3  (predict for XP_010651252.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100248441
vvi-r.5
for
100248441
ath-u.5
for
SLO1
bra-r.6
for
103868580
mtr-u.5
for
11434540
ghi-r.1
for
107931758
bna-r.1
for
125609526
bna-r.1
for
106353608
cit-r.1
for
102621837
sly-u.5
for
101255361
sot-r.1
for
102598307
nta-r.1
for
107785689
nta-r.1
for
107829016
osa-u.5
for
9272050
zma-u.5
for
103626239
tae-r.2
for
123158147
hvu-r.1
for
123410508
bdi-r.1
for
100833099


Ortholog ID: 11656
Species vvi ath bra mtr ghi bna bna cit sly sot nta nta osa zma tae hvu bdi
Symbol LOC100248441 SLO1 LOC103868580 LOC11434540 LOC107931758 LOC125609526 LOC106353608 LOC102621837 LOC101255361 LOC102598307 LOC107785689 LOC107829016 LOC9272050 LOC103626239 LOC123158147 LOC123410508 LOC100833099
Function* pentatricopeptide repeat-containing protein At2g22410, mitochondrial SLOW GROWTH 1 pentatricopeptide repeat-containing protein At2g22410, mitochondrial pentatricopeptide repeat-containing protein At2g22410, mitochondrial pentatricopeptide repeat-containing protein At2g22410, mitochondrial pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like pentatricopeptide repeat-containing protein At2g22410, mitochondrial pentatricopeptide repeat-containing protein At2g22410, mitochondrial pentatricopeptide repeat-containing protein At2g22410, mitochondrial pentatricopeptide repeat-containing protein At2g22410, mitochondrial pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like pentatricopeptide repeat-containing protein At2g22410, mitochondrial pentatricopeptide repeat-containing protein At2g22410, mitochondrial pentatricopeptide repeat-containing protein At2g22410, mitochondrial pentatricopeptide repeat-containing protein At2g22410, mitochondrial pentatricopeptide repeat-containing protein At2g22410, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae00970 Aminoacyl-tRNA biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100248441 816772 103868580 11434540 107931758 125609526 106353608 102621837 101255361 102598307 107785689 107829016 9272050 103626239 123158147 123410508 100833099
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