ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100248471	probable GABA transporter 2
vvi-r.5	100248471	probable GABA transporter 2
ath-u.5	AT5G41800	Transmembrane amino acid transporter family protein
gma-u.5	100815232	putative GABA transporter
ppo-u.5	7467100	probable GABA transporter 2
ppo-u.5	7497835	probable GABA transporter 2
mtr-u.5	25502165	probable GABA transporter 2
sly-u.5	101262033	probable GABA transporter 2
osa-u.5	4326627	probable GABA transporter 2
osa-u.5	4339758	probable GABA transporter 2
zma-u.5	103651482	probable GABA transporter 2

functional annotation

KEGG

GO BP

GO CC

GO:0005886 [list] [network] plasma membrane

(987 genes)

IEA

GO MF

Protein

XP_002273161.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, cysk 3, nucl_plas 3, golg_plas 3, E.R._plas 3, mito_plas 3, cyto_plas 3

(predict for XP_002273161.1)

Subcellular
localization
TargetP

other 9

(predict for XP_002273161.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100248471	vvi-r.5 for 100248471	ath-u.5 for AT5G41800	gma-u.5 for 100815232	ppo-u.5 for 7467100	ppo-u.5 for 7497835	mtr-u.5 for 25502165	sly-u.5 for 101262033	osa-u.5 for 4326627	osa-u.5 for 4339758	zma-u.5 for 103651482

Ortholog ID: 6096

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

probable GABA transporter 2

Transmembrane amino acid transporter family protein

putative GABA transporter

probable GABA transporter 2

putative GABA transporter 2

probable GABA transporter 2

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	2
gma00905	Brassinosteroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00940	Phenylpropanoid biosynthesis	3
ppo00941	Flavonoid biosynthesis	3
ppo00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	3
ppo00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
ppo01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00620	Pyruvate metabolism	2
ghi00630	Glyoxylate and dicarboxylate metabolism	2
ghi00650	Butanoate metabolism	2
ghi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00860	Porphyrin metabolism	4
ghi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00860	Porphyrin metabolism	4
nta00280	Valine, leucine and isoleucine degradation	4
nta00640	Propanoate metabolism	2
nta00785	Lipoic acid metabolism	2
nta01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00960	Tropane, piperidine and pyridine alkaloid biosynthesis	2
osa00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	2
osa03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2
zma03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	3
sbi00020	Citrate cycle (TCA cycle)	2
sbi00480	Glutathione metabolism	2
sbi01200	Carbon metabolism	2
sbi01210	2-Oxocarboxylic acid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100248471

834185

100815232

103864123

103850231

7467100

7497835

25502165

107947109

107952072

106449722

125576578

102616287

101262033

102594414

107782566

107800749

4339758

4326627

103651482

123069982

123421053

123443903

8054398

100833078

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100248471 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100248471 (vvi-u.5 coexpression data)


Species	vvi	ath	gma	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	2	1	1	2	1	1	2	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100248471 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100248471 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**