Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100249860   F-box protein At5g49610 
 vvi-r.5   100249860   F-box protein At5g49610 
 vvi-u.5   104882323   F-box protein At5g49610 
 ath-u.5   AT5G49610   F-box family protein 
 gma-u.5   100811223   F-box protein At5g49610 
 bra-r.6   103854616   F-box protein At5g49610 
 ppo-u.5   7468115   F-box protein At5g49610 
 mtr-u.5   11413897   F-box protein At5g49610 
 ghi-r.1   121203678   F-box protein At5g49610 
 ghi-r.1   107936100   F-box protein At5g49610 
 ghi-r.1   107896402   F-box protein At5g49610 
 bna-r.1   106367758   F-box protein At5g49610 
 bna-r.1   106382503   F-box protein At5g49610 
 cit-r.1   102607000   F-box protein At5g49610 
 sly-u.5   101244267   F-box protein At5g49610 
 sot-r.1   102587170   F-box protein At5g49610 
 nta-r.1   107792251   F-box protein At5g49610-like 

close


Top 50 coexpressed genes to 100249860 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100249860 (vvi-u.5 coexpression data)

CoexMap"100249860"


vviLOC100249860 | Entrez gene ID : 100249860    
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta bdi osa tae zma cre sbi hvu
Paralog 3 1 1 1 1 1 3 2 1 1 1 1 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002273848.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 2,  chlo 1  (predict for XP_002273848.1)
Subcellular
localization
TargetP
other 4,  scret 3  (predict for XP_002273848.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100249860
vvi-r.5
for
100249860
vvi-u.5
for
104882323
ath-u.5
for
AT5G49610
gma-u.5
for
100811223
bra-r.6
for
103854616
ppo-u.5
for
7468115
mtr-u.5
for
11413897
ghi-r.1
for
121203678
ghi-r.1
for
107936100
ghi-r.1
for
107896402
bna-r.1
for
106367758
bna-r.1
for
106382503
cit-r.1
for
102607000
sly-u.5
for
101244267
sot-r.1
for
102587170
nta-r.1
for
107792251


Ortholog ID: 12682
Species vvi vvi ath gma bra ppo mtr ghi ghi ghi bna bna cit sly sot nta
Symbol LOC100249860 LOC104882323 AT5G49610 LOC100811223 LOC103854616 LOC7468115 LOC11413897 LOC107936100 LOC107896402 LOC107916218 LOC106367758 LOC106382503 LOC102607000 LOC101244267 LOC102587170 LOC107792251
Function* F-box protein At5g49610 F-box protein At5g49610 F-box family protein F-box protein At5g49610 F-box protein At5g49610 F-box protein At5g49610 F-box protein At5g49610 F-box protein At5g49610 F-box protein At5g49610 F-box protein At5g49610 F-box protein At5g49610 F-box protein At5g49610 F-box protein At5g49610 F-box protein At5g49610 F-box protein At5g49610 F-box protein At5g49610-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100249860 104882323 835023 100811223 103854616 7468115 11413897 107936100 107896402 107916218 106367758 106382503 102607000 101244267 102587170 107792251
The preparation time of this page was 1.5 [sec].