ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
vvi-u.5	100250498	probable transcription factor KAN2
vvi-r.5	100250498	probable transcription factor KAN2
vvi-u.5	100256368	probable transcription factor KAN2
ath-u.5	KAN3	Homeodomain-like superfamily protein
ath-u.5	KAN2	Homeodomain-like superfamily protein
gma-u.5	100798081	probable transcription factor KAN2
gma-u.5	100816381	probable transcription factor KAN2
bra-r.6	103868892	probable transcription factor KAN2
bra-r.6	103840172	probable transcription factor KAN2
ppo-u.5	7456091	probable transcription factor KAN2
mtr-u.5	11421697	probable transcription factor KAN2
mtr-u.5	11420549	probable transcription factor KAN2
ghi-r.1	107944237	probable transcription factor KAN2
ghi-r.1	107944161	probable transcription factor KAN2
ghi-r.1	107920214	probable transcription factor KAN2
bna-r.1	106378158	probable transcription factor KAN2
bna-r.1	106372959	probable transcription factor KAN3
bna-r.1	125608742	probable transcription factor KAN2
cit-r.1	102611053	probable transcription factor KAN2
sly-u.5	101265660	probable transcription factor KAN2
sly-u.5	101255801	probable transcription factor KAN2
sly-u.5	101243626	probable transcription factor KAN2
sot-r.1	102585505	probable transcription factor KAN2
sot-r.1	102583062	probable transcription factor KAN2
sot-r.1	102585438	probable transcription factor KAN2
nta-r.1	107784995	putative transcription factor KAN2
nta-r.1	107819743	putative transcription factor KAN2
nta-r.1	107783157	putative transcription factor KAN2
osa-u.5	107276474	probable transcription factor KAN2
osa-u.5	4344718	probable transcription factor RL9
zma-u.5	100281529	KANADI-like transcription factor FEATHERED
zma-u.5	100384098	uncharacterized LOC100384098
tae-r.2	123169627	probable transcription factor KAN2
tae-r.2	123145163	probable transcription factor KAN2
hvu-r.1	123404025	probable transcription factor KAN2
hvu-r.1	123403791	probable transcription factor KAN2
sbi-r.1	110434480	probable transcription factor KAN2
sbi-r.1	8080854	probable transcription factor KAN2
bdi-r.1	104583397	probable transcription factor KAN2
bdi-r.1	100834114	probable transcription factor KAN2
bdi-r.1	100821114	probable transcription factor KAN2

Top 50 coexpressed genes to 100250498 (vvi-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100250498 (vvi-u.5 coexpression data)

CoexMap"100250498"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0010158 [list] [network] abaxial cell fate specification	(7 genes)	IEA
GO:0006355 [list] [network] regulation of DNA-templated transcription	(1359 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus

(2597 genes)

IEA

GO MF

GO:0000976 [list] [network] transcription cis-regulatory region binding

(319 genes)

IEA

Protein

XP_010663129.1 [sequence] [blastp]
XP_010663135.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, chlo 1, extr 1	(predict for XP_010663129.1)
nucl 9, chlo 1, extr 1	(predict for XP_010663135.1)

Subcellular
localization
TargetP

other 4, chlo 4	(predict for XP_010663129.1)
other 4, chlo 4	(predict for XP_010663135.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100250498	vvi-r.5 for 100250498	vvi-u.5 for 100256368	ath-u.5 for KAN3	ath-u.5 for KAN2	gma-u.5 for 100798081	gma-u.5 for 100816381	bra-r.6 for 103868892	bra-r.6 for 103840172	ppo-u.5 for 7456091	mtr-u.5 for 11421697	mtr-u.5 for 11420549	ghi-r.1 for 107944237	ghi-r.1 for 107944161	ghi-r.1 for 107920214	bna-r.1 for 106378158	bna-r.1 for 106372959	bna-r.1 for 125608742	cit-r.1 for 102611053	sly-u.5 for 101265660	sly-u.5 for 101255801	sly-u.5 for 101243626	sot-r.1 for 102585505	sot-r.1 for 102583062	sot-r.1 for 102585438	nta-r.1 for 107784995	nta-r.1 for 107819743	nta-r.1 for 107783157	osa-u.5 for 107276474	osa-u.5 for 4344718	zma-u.5 for 100281529	zma-u.5 for 100384098	tae-r.2 for 123169627	tae-r.2 for 123145163	hvu-r.1 for 123404025	hvu-r.1 for 123403791	sbi-r.1 for 110434480	sbi-r.1 for 8080854	bdi-r.1 for 104583397	bdi-r.1 for 100834114	bdi-r.1 for 100821114

Ortholog

Ortholog ID: 2488

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

LOC100250498

LOC100256368

KAN3

KAN2

Function^*