ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100251622	putative cyclin-D6-1
vvi-r.5	100251622	putative cyclin-D6-1
vvi-u.5	100251144	putative cyclin-D6-1
ath-u.5	CYCD6;1	Cyclin D6;1
gma-u.5	100799951	putative cyclin-D6-1-like
ppo-u.5	7458854	putative cyclin-D6-1
ppo-u.5	7494324	putative cyclin-D6-1
mtr-u.5	11427737	putative cyclin-D6-1
sly-u.5	101258279	putative cyclin-D6-1
sly-u.5	101264893	putative cyclin-D6-1
sly-u.5	101265894	putative cyclin-D6-1
osa-u.5	4343569	cyclin-D6-1-like
zma-u.5	100282689	CYCD6

functional annotation

KEGG

GO BP

GO:0044772 [list] [network] mitotic cell cycle phase transition	(32 genes)	IEA
GO:0000079 [list] [network] regulation of cyclin-dependent protein serine/threonine kinase activity	(42 genes)	IEA

GO CC

GO:0000307 [list] [network] cyclin-dependent protein kinase holoenzyme complex	(60 genes)	IEA
GO:0005634 [list] [network] nucleus	(2597 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(4496 genes)	IEA

GO MF

GO:0016538 [list] [network] cyclin-dependent protein serine/threonine kinase regulator activity

(41 genes)

IEA

Protein

XP_010646366.3 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cysk 2, nucl_plas 2, cyto 1

(predict for XP_010646366.3)

Subcellular
localization
TargetP

other 9

(predict for XP_010646366.3)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100251622	vvi-r.5 for 100251622	vvi-u.5 for 100251144	ath-u.5 for CYCD6;1	gma-u.5 for 100799951	ppo-u.5 for 7458854	ppo-u.5 for 7494324	mtr-u.5 for 11427737	sly-u.5 for 101258279	sly-u.5 for 101264893	sly-u.5 for 101265894	osa-u.5 for 4343569	zma-u.5 for 100282689

Ortholog ID: 2747

Species

vvi

ath

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

CYCD6;1

Function^*

putative cyclin-D6-1

Cyclin D6;1

putative cyclin-D6-1

cyclin-D6-1-like

CYCD6

cyclin-D6-1

cyclin-D6-1-like

cyclin-D6-1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00902	Monoterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	2
ppo01240	Biosynthesis of cofactors	2
ppo01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	5
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	3
sly04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00270	Cysteine and methionine metabolism	2
sbi04120	Ubiquitin mediated proteolysis	2
sbi03082	ATP-dependent chromatin remodeling	2

Expression

Expression pattern

Entrez Gene ID^*

100251144

100251622

828000

103846727

7496998

7458854

11427737

107938049

107925280

106386183

106392302

102610436

102631114

101258279

101265894

102583955

102582703

107774274

107770219

4343569

100282689

123041136

123049134

123410367

123429870

8081739

100821682

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100251622 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100251622 (vvi-u.5 coexpression data)


Species	vvi	ath	gma	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	1	1	2	1	3	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100251622 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100251622 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**