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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100251681   chaperonin-like RbcX protein 2, chloroplastic 
 vvi-r.5   100251681   chaperonin-like RbcX protein 2, chloroplastic 
 vvi-m.5   100251681   chaperonin-like RbcX protein 2, chloroplastic 
 vvi-u.5   100246804   chaperonin-like RbcX protein 2, chloroplastic 
 ath-u.5   RbcX2   Chaperonin-like RbcX protein 
 gma-u.5   100526969   RbcX domain-containing protein 
 gma-u.5   100526846   RbcX-like protein 
 gma-u.5   100786585   uncharacterized LOC100786585 
 bra-r.6   103851304   chaperonin-like RbcX protein 2, chloroplastic 
 bra-r.6   103856399   chaperonin-like RbcX protein 2, chloroplastic 
 ppo-u.5   7465149   chaperonin-like RbcX protein 2, chloroplastic 
 ppo-u.5   7467367   chaperonin-like RbcX protein 2, chloroplastic 
 mtr-u.5   11438053   chaperonin-like RbcX protein 2, chloroplastic 
 ghi-r.1   107906694   chaperonin-like RbcX protein 2, chloroplastic 
 ghi-r.1   107959304   chaperonin-like RbcX protein 2, chloroplastic 
 ghi-r.1   107889334   chaperonin-like RbcX protein 2, chloroplastic 
 bna-r.1   106386739   chaperonin-like RbcX protein 2, chloroplastic 
 bna-r.1   106380733   chaperonin-like RbcX protein 2, chloroplastic 
 bna-r.1   106434466   chaperonin-like RbcX protein 2, chloroplastic 
 cit-r.1   102628108   hypothetical protein 
 sly-u.5   101249788   chaperonin-like RbcX protein 2, chloroplastic 
 sot-r.1   102605253   uncharacterized LOC102605253 
 nta-r.1   107821402   chaperonin-like RbcX protein 2, chloroplastic 
 nta-r.1   107762404   chaperonin-like RbcX protein 2, chloroplastic 
 osa-u.5   4343652   chaperonin-like RbcX protein 2, chloroplastic 
 osa-u.5   4334513   chaperonin-like RbcX protein 2, chloroplastic 
 zma-u.5   100275464   uncharacterized LOC100275464 
 zma-u.5   100277775   Chaperonin-like RbcX protein 
 zma-u.5   103645038   chaperonin-like RbcX protein 2, chloroplastic 
 tae-r.2   123188203   chaperonin-like RbcX protein 2, chloroplastic 
 tae-r.2   123123362   chaperonin-like RbcX protein 2, chloroplastic 
 tae-r.2   123113860   chaperonin-like RbcX protein 2, chloroplastic 
 hvu-r.1   123425641   uncharacterized LOC123425641 
 hvu-r.1   123399062   chaperonin-like RbcX protein 2, chloroplastic 
 sbi-r.1   8057106   chaperonin-like RbcX protein 2, chloroplastic 
 bdi-r.1   100825976   chaperonin-like RbcX protein 2, chloroplastic 
 bdi-r.1   100839586   chaperonin-like RbcX protein 2, chloroplastic 

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Top 50 coexpressed genes to 100251681 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100251681 (vvi-u.5 coexpression data)

CoexMap"100251681"


vviLOC100251681 | Entrez gene ID : 100251681      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 3 2 2 1 3 3 1 1 1 2 2 3 3 2 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0110102 [list] [network] ribulose bisphosphate carboxylase complex assembly  (3 genes)  IEA  
GO CC
GO MF
GO:0044183 [list] [network] protein folding chaperone  (68 genes)  IEA  
Protein XP_002279163.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4,  plas 1,  extr 1  (predict for XP_002279163.1)
Subcellular
localization
TargetP
scret 4,  other 3  (predict for XP_002279163.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100251681
vvi-r.5
for
100251681
vvi-m.5
for
100251681
vvi-u.5
for
100246804
ath-u.5
for
RbcX2
gma-u.5
for
100526969
gma-u.5
for
100526846
gma-u.5
for
100786585
bra-r.6
for
103851304
bra-r.6
for
103856399
ppo-u.5
for
7465149
ppo-u.5
for
7467367
mtr-u.5
for
11438053
ghi-r.1
for
107906694
ghi-r.1
for
107959304
ghi-r.1
for
107889334
bna-r.1
for
106386739
bna-r.1
for
106380733
bna-r.1
for
106434466
cit-r.1
for
102628108
sly-u.5
for
101249788
sot-r.1
for
102605253
nta-r.1
for
107821402
nta-r.1
for
107762404
osa-u.5
for
4343652
osa-u.5
for
4334513
zma-u.5
for
100275464
zma-u.5
for
100277775
zma-u.5
for
103645038
tae-r.2
for
123188203
tae-r.2
for
123123362
tae-r.2
for
123113860
hvu-r.1
for
123425641
hvu-r.1
for
123399062
sbi-r.1
for
8057106
bdi-r.1
for
100825976
bdi-r.1
for
100839586


Ortholog ID: 4787
Species vvi vvi ath gma gma gma bra bra ppo ppo mtr ghi ghi ghi bna bna bna cit sly sot nta nta osa osa zma zma zma tae tae tae hvu hvu sbi bdi bdi
Symbol LOC100251681 LOC100246804 RbcX2 LOC100526969 LOC100526846 LOC100786585 LOC103851304 LOC103856399 LOC7465149 LOC7467367 LOC11438053 LOC107906694 LOC107959304 LOC107889334 LOC106386739 LOC106380733 LOC106434466 LOC102628108 LOC101249788 LOC102605253 LOC107821402 LOC107762404 LOC4343652 LOC4334513 LOC100275464 LOC100277775 LOC103645038 LOC123113860 LOC123052358 LOC123105550 LOC123425641 LOC123399062 LOC8057106 LOC100825976 LOC100839586
Function* chaperonin-like RbcX protein 2, chloroplastic chaperonin-like RbcX protein 2, chloroplastic Chaperonin-like RbcX protein RbcX domain-containing protein RbcX-like protein uncharacterized LOC100786585 chaperonin-like RbcX protein 2, chloroplastic chaperonin-like RbcX protein 2, chloroplastic chaperonin-like RbcX protein 2, chloroplastic chaperonin-like RbcX protein 2, chloroplastic chaperonin-like RbcX protein 2, chloroplastic chaperonin-like RbcX protein 2, chloroplastic chaperonin-like RbcX protein 2, chloroplastic chaperonin-like RbcX protein 2, chloroplastic chaperonin-like RbcX protein 2, chloroplastic chaperonin-like RbcX protein 2, chloroplastic chaperonin-like RbcX protein 2, chloroplastic hypothetical protein chaperonin-like RbcX protein 2, chloroplastic uncharacterized LOC102605253 chaperonin-like RbcX protein 2, chloroplastic chaperonin-like RbcX protein 2, chloroplastic chaperonin-like RbcX protein 2, chloroplastic chaperonin-like RbcX protein 2, chloroplastic uncharacterized LOC100275464 Chaperonin-like RbcX protein chaperonin-like RbcX protein 2, chloroplastic chaperonin-like RbcX protein 2, chloroplastic chaperonin-like RbcX protein 2, chloroplastic chaperonin-like RbcX protein 2, chloroplastic uncharacterized LOC123425641 chaperonin-like RbcX protein 2, chloroplastic chaperonin-like RbcX protein 2, chloroplastic chaperonin-like RbcX protein 2, chloroplastic chaperonin-like RbcX protein 2, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 6
vvi00630 Glyoxylate and dicarboxylate metabolism 5
vvi00260 Glycine, serine and threonine metabolism 4
vvi01230 Biosynthesis of amino acids 3
vvi00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 3
gma00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 3
gma00010 Glycolysis / Gluconeogenesis 2
gma00030 Pentose phosphate pathway 2
gma00051 Fructose and mannose metabolism 2
gma00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00910 Nitrogen metabolism 2
gma00053 Ascorbate and aldarate metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00561 Glycerolipid metabolism 2
bra00566 Sulfoquinovose metabolism 2
bra00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra01200 Carbon metabolism 2
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 2
mtr00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 5
ghi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 5
ghi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 4
ghi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00740 Riboflavin metabolism 2
nta01240 Biosynthesis of cofactors 2
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00740 Riboflavin metabolism 2
nta01240 Biosynthesis of cofactors 2
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00561 Glycerolipid metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 5
bdi01200 Carbon metabolism 5
bdi00710 Carbon fixation by Calvin cycle 3
bdi00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100251681 100246804 832106 100526969 100526846 100786585 103851304 103856399 7465149 7467367 11438053 107906694 107959304 107889334 106386739 106380733 106434466 102628108 101249788 102605253 107821402 107762404 4343652 4334513 100275464 100277775 103645038 123113860 123052358 123105550 123425641 123399062 8057106 100825976 100839586
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