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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100252326   probable ADP-ribosylation factor GTPase-activating protein AGD8 
 vvi-r.5   100252326   probable ADP-ribosylation factor GTPase-activating protein AGD8 
 vvi-m.5   100252326   probable ADP-ribosylation factor GTPase-activating protein AGD8 
 ath-u.5   RPA   root and pollen arfgap 
 ath-u.5   AGD8   ARF-GAP domain 8 
 ath-u.5   AGD9   ARF-GAP domain 9 
 gma-u.5   100789796   probable ADP-ribosylation factor GTPase-activating protein AGD8 
 gma-u.5   100785169   probable ADP-ribosylation factor GTPase-activating protein AGD8 
 bra-r.6   103860951   probable ADP-ribosylation factor GTPase-activating protein AGD8 
 bra-r.6   103827710   probable ADP-ribosylation factor GTPase-activating protein AGD9 
 ppo-u.5   18096976   probable ADP-ribosylation factor GTPase-activating protein AGD8 
 ppo-u.5   18094163   probable ADP-ribosylation factor GTPase-activating protein AGD8 
 mtr-u.5   11418528   probable ADP-ribosylation factor GTPase-activating protein AGD8 
 mtr-u.5   11440486   probable ADP-ribosylation factor GTPase-activating protein AGD8 
 ghi-r.1   107912182   probable ADP-ribosylation factor GTPase-activating protein AGD8 
 ghi-r.1   107924282   probable ADP-ribosylation factor GTPase-activating protein AGD8 
 ghi-r.1   107935173   probable ADP-ribosylation factor GTPase-activating protein AGD8 
 bna-r.1   106440211   probable ADP-ribosylation factor GTPase-activating protein AGD8 
 bna-r.1   106391862   probable ADP-ribosylation factor GTPase-activating protein AGD8 
 cit-r.1   102625979   probable ADP-ribosylation factor GTPase-activating protein AGD8 
 sly-u.5   101261344   probable ADP-ribosylation factor GTPase-activating protein AGD9 
 sly-u.5   101244022   probable ADP-ribosylation factor GTPase-activating protein AGD9 
 sot-r.1   102602036   probable ADP-ribosylation factor GTPase-activating protein AGD9 
 sot-r.1   102597971   probable ADP-ribosylation factor GTPase-activating protein AGD9 
 nta-r.1   107771184   putative ADP-ribosylation factor GTPase-activating protein AGD8 
 nta-r.1   107790632   putative ADP-ribosylation factor GTPase-activating protein AGD9 
 nta-r.1   107787704   putative ADP-ribosylation factor GTPase-activating protein AGD9 
 osa-u.5   4334823   probable ADP-ribosylation factor GTPase-activating protein AGD9 
 osa-u.5   4349482   probable ADP-ribosylation factor GTPase-activating protein AGD8 
 zma-u.5   100283451   uncharacterized LOC100283451 
 zma-u.5   103637695   probable ADP-ribosylation factor GTPase-activating protein AGD8 
 zma-u.5   100216842   putative ARF GTPase-activating domain family protein 
 tae-r.2   123181464   probable ADP-ribosylation factor GTPase-activating protein AGD8 
 tae-r.2   123050198   probable ADP-ribosylation factor GTPase-activating protein AGD8 
 hvu-r.1   123436162   probable ADP-ribosylation factor GTPase-activating protein AGD8 
 hvu-r.1   123395185   probable ADP-ribosylation factor GTPase-activating protein AGD9 
 sbi-r.1   8060851   probable ADP-ribosylation factor GTPase-activating protein AGD8 
 sbi-r.1   8055144   probable ADP-ribosylation factor GTPase-activating protein AGD9 
 bdi-r.1   100826708   probable ADP-ribosylation factor GTPase-activating protein AGD9 
 bdi-r.1   100821825   probable ADP-ribosylation factor GTPase-activating protein AGD8 
 cre-r.1   CHLRE_17g715350v5   uncharacterized protein 

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Top 50 coexpressed genes to 100252326 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100252326 (vvi-u.5 coexpression data)

CoexMap"100252326"


vviLOC100252326 | Entrez gene ID : 100252326      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 3 2 2 2 2 3 2 1 2 2 3 2 3 2 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi04144 [list] [network] Endocytosis (129 genes)
GO BP
GO:0048205 [list] [network] COPI coating of Golgi vesicle  (1 genes)  IEA  
GO CC
GO MF
GO:0005096 [list] [network] GTPase activator activity  (51 genes)  IEA  
Protein XP_002278066.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  nucl_plas 5  (predict for XP_002278066.2)
Subcellular
localization
TargetP
other 9  (predict for XP_002278066.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100252326
vvi-r.5
for
100252326
vvi-m.5
for
100252326
ath-u.5
for
RPA
ath-u.5
for
AGD8
ath-u.5
for
AGD9
gma-u.5
for
100789796
gma-u.5
for
100785169
bra-r.6
for
103860951
bra-r.6
for
103827710
ppo-u.5
for
18096976
ppo-u.5
for
18094163
mtr-u.5
for
11418528
mtr-u.5
for
11440486
ghi-r.1
for
107912182
ghi-r.1
for
107924282
ghi-r.1
for
107935173
bna-r.1
for
106440211
bna-r.1
for
106391862
cit-r.1
for
102625979
sly-u.5
for
101261344
sly-u.5
for
101244022
sot-r.1
for
102602036
sot-r.1
for
102597971
nta-r.1
for
107771184
nta-r.1
for
107790632
nta-r.1
for
107787704
osa-u.5
for
4334823
osa-u.5
for
4349482
zma-u.5
for
100283451
zma-u.5
for
103637695
zma-u.5
for
100216842
tae-r.2
for
123181464
tae-r.2
for
123050198
hvu-r.1
for
123436162
hvu-r.1
for
123395185
sbi-r.1
for
8060851
sbi-r.1
for
8055144
bdi-r.1
for
100826708
bdi-r.1
for
100821825
cre-r.1
for
CHLRE_17g715350v5


Ortholog ID: 2538
Species vvi ath ath ath gma gma bra ppo ppo mtr mtr ghi ghi ghi bna cit sly sly sot sot nta nta nta osa osa zma zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC100252326 RPA AGD8 AGD9 LOC100789796 LOC100785169 LOC103860951 LOC18096976 LOC18094163 LOC11418528 LOC11440486 LOC107924282 LOC107946832 LOC107950174 LOC106440211 LOC102625979 LOC101261344 LOC101244022 LOC102602036 LOC102597971 LOC107771184 LOC107790632 LOC107785612 LOC4334823 LOC4349482 LOC100283451 LOC100216842 LOC100191606 LOC123181464 LOC123125855 LOC123436162 LOC123395185 LOC8060851 LOC8055144 LOC100826708 LOC100821825 CHLRE_17g715350v5
Function* probable ADP-ribosylation factor GTPase-activating protein AGD8 root and pollen arfgap ARF-GAP domain 8 ARF-GAP domain 9 probable ADP-ribosylation factor GTPase-activating protein AGD8 probable ADP-ribosylation factor GTPase-activating protein AGD8 probable ADP-ribosylation factor GTPase-activating protein AGD8 probable ADP-ribosylation factor GTPase-activating protein AGD8 probable ADP-ribosylation factor GTPase-activating protein AGD8 probable ADP-ribosylation factor GTPase-activating protein AGD8 probable ADP-ribosylation factor GTPase-activating protein AGD8 probable ADP-ribosylation factor GTPase-activating protein AGD8 probable ADP-ribosylation factor GTPase-activating protein AGD9 probable ADP-ribosylation factor GTPase-activating protein AGD8 probable ADP-ribosylation factor GTPase-activating protein AGD8 probable ADP-ribosylation factor GTPase-activating protein AGD8 probable ADP-ribosylation factor GTPase-activating protein AGD9 probable ADP-ribosylation factor GTPase-activating protein AGD9 probable ADP-ribosylation factor GTPase-activating protein AGD9 probable ADP-ribosylation factor GTPase-activating protein AGD9 putative ADP-ribosylation factor GTPase-activating protein AGD8 putative ADP-ribosylation factor GTPase-activating protein AGD9 putative ADP-ribosylation factor GTPase-activating protein AGD8 probable ADP-ribosylation factor GTPase-activating protein AGD9 probable ADP-ribosylation factor GTPase-activating protein AGD8 uncharacterized LOC100283451 putative ARF GTPase-activating domain family protein putative ARF GTPase-activating domain family protein probable ADP-ribosylation factor GTPase-activating protein AGD8 probable ADP-ribosylation factor GTPase-activating protein AGD8 probable ADP-ribosylation factor GTPase-activating protein AGD8 probable ADP-ribosylation factor GTPase-activating protein AGD9 probable ADP-ribosylation factor GTPase-activating protein AGD8 probable ADP-ribosylation factor GTPase-activating protein AGD9 probable ADP-ribosylation factor GTPase-activating protein AGD9 probable ADP-ribosylation factor GTPase-activating protein AGD8 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 2
ath00053 Ascorbate and aldarate metabolism 2
ath00520 Amino sugar and nucleotide sugar metabolism 2
ath00541 Biosynthesis of various nucleotide sugars 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00541 Biosynthesis of various nucleotide sugars 2
ath01250 Biosynthesis of nucleotide sugars 2
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 5
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma01240 Biosynthesis of cofactors 3
gma04141 Protein processing in endoplasmic reticulum 2
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 2
bra00230 Purine metabolism 2
bra00240 Pyrimidine metabolism 2
bra01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 5
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
mtr00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 4
ghi04130 SNARE interactions in vesicular transport 2
ghi03060 Protein export 2
ghi00061 Fatty acid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 7
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 4
bna00040 Pentose and glucuronate interconversions 4
bna00053 Ascorbate and aldarate metabolism 4
bna00520 Amino sugar and nucleotide sugar metabolism 4
bna00541 Biosynthesis of various nucleotide sugars 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 3
sly01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta00230 Purine metabolism 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 4
nta04144 Endocytosis 4
nta03060 Protein export 2
nta04517 IgSF CAM signaling 2
nta05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta04144 Endocytosis 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01250 Biosynthesis of nucleotide sugars 4
osa04144 Endocytosis 4
osa00520 Amino sugar and nucleotide sugar metabolism 3
osa00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
zma04016 MAPK signaling pathway - plant 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00520 Amino sugar and nucleotide sugar metabolism 4
zma01250 Biosynthesis of nucleotide sugars 3
zma04144 Endocytosis 2
zma00040 Pentose and glucuronate interconversions 2
zma00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 5
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae04144 Endocytosis 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 5
tae04120 Ubiquitin mediated proteolysis 4
tae04144 Endocytosis 3
tae04136 Autophagy - other 3
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00280 Valine, leucine and isoleucine degradation 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00520 Amino sugar and nucleotide sugar metabolism 8
sbi01250 Biosynthesis of nucleotide sugars 7
sbi01240 Biosynthesis of cofactors 3
sbi00040 Pentose and glucuronate interconversions 2
sbi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100252326 818088 827512 834718 100789796 100785169 103860951 18096976 18094163 11418528 11440486 107924282 107946832 107950174 106440211 102625979 101261344 101244022 102602036 102597971 107771184 107790632 107785612 4334823 4349482 100283451 100216842 100191606 123181464 123125855 123436162 123395185 8060851 8055144 100826708 100821825 5725992
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