ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100253010	uncharacterized LOC100253010
vvi-r.5	100253010	uncharacterized LOC100253010
vvi-m.5	100253010	uncharacterized LOC100253010
gma-u.5	100813446	probable ubiquitin-conjugating enzyme E2 C
gma-u.5	100820153	probable ubiquitin-conjugating enzyme E2 C
ppo-u.5	7457875	uncharacterized LOC7457875
ppo-u.5	7468408	ubiquitin-conjugating enzyme E2 20
mtr-u.5	11406985	probable ubiquitin-conjugating enzyme E2 C
ghi-r.1	107937604	probable ubiquitin-conjugating enzyme E2 C
ghi-r.1	107904261	probable ubiquitin-conjugating enzyme E2 C
ghi-r.1	107904087	ubiquitin-conjugating enzyme E2 20
cit-r.1	102630874	uncharacterized LOC102630874

functional annotation

KEGG

vvi04120 [list] [network] Ubiquitin mediated proteolysis (130 genes)

GO BP

GO CC

GO MF

Protein

XP_002275915.1 [sequence] [blastp]
XP_059597540.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, chlo 1, extr 1, vacu 1	(predict for XP_002275915.1)
nucl 5, cyto 2, chlo 1, extr 1	(predict for XP_059597540.1)

Subcellular
localization
TargetP

other 4, chlo 3	(predict for XP_002275915.1)
other 4, chlo 3	(predict for XP_059597540.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100253010	vvi-r.5 for 100253010	vvi-m.5 for 100253010	gma-u.5 for 100813446	gma-u.5 for 100820153	ppo-u.5 for 7457875	ppo-u.5 for 7468408	mtr-u.5 for 11406985	ghi-r.1 for 107937604	ghi-r.1 for 107904261	ghi-r.1 for 107904087	cit-r.1 for 102630874

Ortholog ID: 15002

Species

vvi

gma

ppo

mtr

ghi

cit

Symbol

Function^*

uncharacterized LOC100253010

probable ubiquitin-conjugating enzyme E2 C

uncharacterized LOC7457875

ubiquitin-conjugating enzyme E2 20

probable ubiquitin-conjugating enzyme E2 C

ubiquitin-conjugating enzyme E2 20

uncharacterized LOC102630874

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	2
gma00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	4
ppo04144	Endocytosis	2
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00260	Glycine, serine and threonine metabolism	2
mtr00350	Tyrosine metabolism	2
mtr00360	Phenylalanine metabolism	2
mtr00410	beta-Alanine metabolism	2
mtr00950	Isoquinoline alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01232	Nucleotide metabolism	4
ghi04120	Ubiquitin mediated proteolysis	2
ghi00230	Purine metabolism	2
ghi00240	Pyrimidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	2
ghi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	2

Expression

Expression pattern

Entrez Gene ID^*

100253010

100813446

100820153

7457875

7468408

11406985

107937604

107904261

107904087

102630874


Species	vvi	gma	ppo	mtr	ghi	cit	cre	bra	ath	hvu	nta	bna	tae	bdi	osa	zma	sly	sot	sbi
Paralog	3	2	2	1	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100253010 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100253010 (vvi-u.5 coexpression data)

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100253010 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100253010 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**