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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100254871   double-stranded RNA-binding protein 3 
 vvi-r.5   100254871   double-stranded RNA-binding protein 3 
 vvi-u.5   100266564   double-stranded RNA-binding protein 2 
 vvi-u.5   100248336   double-stranded RNA-binding protein 2 
 vvi-u.5   100245249   double-stranded RNA-binding protein 2 
 ath-u.5   DRB2   dsRNA-binding protein 2 
 ath-u.5   DRB3   dsRNA-binding protein 3 
 ath-u.5   DRB5   dsRNA-binding protein 5 
 gma-u.5   100790730   double-stranded RNA-binding protein 2 
 gma-u.5   100814005   double-stranded RNA-binding protein 2-like 
 gma-u.5   100815739   double-stranded RNA-binding protein 2-like 
 bra-r.6   103864884   double-stranded RNA-binding protein 2 
 bra-r.6   103864051   double-stranded RNA-binding protein 5 
 bra-r.6   103854282   double-stranded RNA-binding protein 3 
 ppo-u.5   18104048   double-stranded RNA-binding protein 2 
 ppo-u.5   18098894   double-stranded RNA-binding protein 2 
 mtr-u.5   11408899   double-stranded RNA-binding protein 2 
 mtr-u.5   11432263   double-stranded RNA-binding protein 2 
 mtr-u.5   25492444   double-stranded RNA-binding protein 2 
 ghi-r.1   107888286   double-stranded RNA-binding protein 2 
 ghi-r.1   107963879   double-stranded RNA-binding protein 2 
 ghi-r.1   107961966   double-stranded RNA-binding protein 2 
 bna-r.1   106446881   double-stranded RNA-binding protein 2 
 bna-r.1   106446879   double-stranded RNA-binding protein 2-like 
 bna-r.1   106347735   double-stranded RNA-binding protein 3 
 cit-r.1   102607899   double-stranded RNA-binding protein 3 
 cit-r.1   102626169   double-stranded RNA-binding protein 5-like 
 cit-r.1   102625010   double-stranded RNA-binding protein 2 
 sly-u.5   101252489   double-stranded RNA-binding protein 2 
 sly-u.5   101259606   double-stranded RNA-binding protein 2 
 sot-r.1   102588953   double-stranded RNA-binding protein 2 
 sot-r.1   102585580   double-stranded RNA-binding protein 2-like 
 nta-r.1   107764002   double-stranded RNA-binding protein 2-like 
 nta-r.1   107823722   double-stranded RNA-binding protein 2-like 
 nta-r.1   107773867   double-stranded RNA-binding protein 2 
 osa-u.5   4337826   double-stranded RNA-binding protein 2-like 
 osa-u.5   4347527   double-stranded RNA-binding protein 5-like 
 osa-u.5   4348920   double-stranded RNA-binding protein 6-like 
 zma-u.5   100502483   Double-stranded RNA-binding protein 2 
 zma-u.5   100280218   Double-stranded RNA-binding protein 3 
 zma-u.5   100274309   Double-stranded RNA-binding protein 2 
 tae-r.2   123191259   double-stranded RNA-binding protein 2 
 tae-r.2   123122092   double-stranded RNA-binding protein 3 
 tae-r.2   123046060   double-stranded RNA-binding protein 6 
 hvu-r.1   123425445   double-stranded RNA-binding protein 2-like 
 hvu-r.1   123431313   double-stranded RNA-binding protein 6 
 sbi-r.1   8070475   double-stranded RNA-binding protein 6 
 sbi-r.1   8069500   double-stranded RNA-binding protein 2 
 bdi-r.1   100844486   double-stranded RNA-binding protein 6 
 bdi-r.1   100822330   double-stranded RNA-binding protein 2 

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Top 50 coexpressed genes to 100254871 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100254871 (vvi-u.5 coexpression data)

CoexMap"100254871"


vviLOC100254871 | Entrez gene ID : 100254871      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 3 3 3 2 3 3 3 3 2 2 3 3 3 3 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003725 [list] [network] double-stranded RNA binding  (13 genes)  IEA  
Protein XP_002275052.3 [sequence] [blastp]
XP_019080214.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 4,  cyto 1,  mito 1,  cysk 1  (predict for XP_002275052.3)
nucl 8,  cyto 1,  plas 1,  vacu 1,  cyto_plas 1  (predict for XP_019080214.1)
Subcellular
localization
TargetP
mito 2  (predict for XP_002275052.3)
other 5  (predict for XP_019080214.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100254871
vvi-r.5
for
100254871
vvi-u.5
for
100266564
vvi-u.5
for
100248336
vvi-u.5
for
100245249
ath-u.5
for
DRB2
ath-u.5
for
DRB3
ath-u.5
for
DRB5
gma-u.5
for
100790730
gma-u.5
for
100814005
gma-u.5
for
100815739
bra-r.6
for
103864884
bra-r.6
for
103864051
bra-r.6
for
103854282
ppo-u.5
for
18104048
ppo-u.5
for
18098894
mtr-u.5
for
11408899
mtr-u.5
for
11432263
mtr-u.5
for
25492444
ghi-r.1
for
107888286
ghi-r.1
for
107963879
ghi-r.1
for
107961966
bna-r.1
for
106446881
bna-r.1
for
106446879
bna-r.1
for
106347735
cit-r.1
for
102607899
cit-r.1
for
102626169
cit-r.1
for
102625010
sly-u.5
for
101252489
sly-u.5
for
101259606
sot-r.1
for
102588953
sot-r.1
for
102585580
nta-r.1
for
107764002
nta-r.1
for
107823722
nta-r.1
for
107773867
osa-u.5
for
4337826
osa-u.5
for
4347527
osa-u.5
for
4348920
zma-u.5
for
100502483
zma-u.5
for
100280218
zma-u.5
for
100274309
tae-r.2
for
123191259
tae-r.2
for
123122092
tae-r.2
for
123046060
hvu-r.1
for
123425445
hvu-r.1
for
123431313
sbi-r.1
for
8070475
sbi-r.1
for
8069500
bdi-r.1
for
100844486
bdi-r.1
for
100822330


Ortholog ID: 1337
Species vvi vvi vvi ath ath ath gma gma gma bra bra bra ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit cit sly sly sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC100266564 LOC100248336 LOC100245249 DRB2 DRB3 DRB5 LOC100815739 DRB2B LOC100820350 LOC103864884 LOC103854282 LOC103836966 LOC18098894 LOC18107203 LOC11408899 LOC11432263 LOC25492444 LOC107961966 LOC107940119 LOC107962778 LOC106446881 LOC106446879 LOC106391055 LOC102607899 LOC102626169 LOC102611920 LOC101252489 LOC101259606 LOC102588953 LOC102585580 LOC107764002 LOC107791931 LOC107808595 LOC4337826 LOC4347527 LOC4348920 LOC100280218 LOC100274309 LOC100274020 LOC123104324 LOC123181093 LOC123112711 LOC123425445 LOC123431313 LOC8070475 LOC8069500 LOC100844486 LOC100822330
Function* double-stranded RNA-binding protein 2 double-stranded RNA-binding protein 2 double-stranded RNA-binding protein 2 dsRNA-binding protein 2 dsRNA-binding protein 3 dsRNA-binding protein 5 double-stranded RNA-binding protein 2-like dsRNA-binding protein Drb2b double-stranded RNA-binding protein 2 double-stranded RNA-binding protein 2 double-stranded RNA-binding protein 3 double-stranded RNA-binding protein 3 double-stranded RNA-binding protein 2 double-stranded RNA-binding protein 3 double-stranded RNA-binding protein 2 double-stranded RNA-binding protein 2 double-stranded RNA-binding protein 2 double-stranded RNA-binding protein 2 double-stranded RNA-binding protein 2 double-stranded RNA-binding protein 2 double-stranded RNA-binding protein 2 double-stranded RNA-binding protein 2-like double-stranded RNA-binding protein 5 double-stranded RNA-binding protein 3 double-stranded RNA-binding protein 5-like double-stranded RNA-binding protein 2-like double-stranded RNA-binding protein 2 double-stranded RNA-binding protein 2 double-stranded RNA-binding protein 2 double-stranded RNA-binding protein 2-like double-stranded RNA-binding protein 2-like double-stranded RNA-binding protein 2 double-stranded RNA-binding protein 2 double-stranded RNA-binding protein 2-like double-stranded RNA-binding protein 5-like double-stranded RNA-binding protein 6-like Double-stranded RNA-binding protein 3 Double-stranded RNA-binding protein 2 uncharacterized LOC100274020 double-stranded RNA-binding protein 5 double-stranded RNA-binding protein 6 double-stranded RNA-binding protein 2 double-stranded RNA-binding protein 2-like double-stranded RNA-binding protein 6 double-stranded RNA-binding protein 6 double-stranded RNA-binding protein 2 double-stranded RNA-binding protein 6 double-stranded RNA-binding protein 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 5
vvi04016 MAPK signaling pathway - plant 3
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
vvi04016 MAPK signaling pathway - plant 2
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
ath04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath02010 ABC transporters 3
ath04626 Plant-pathogen interaction 2
ath00071 Fatty acid degradation 2
ath04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 4
gma00513 Various types of N-glycan biosynthesis 4
gma04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra02010 ABC transporters 2
bra04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo03040 Spliceosome 2
ppo03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00062 Fatty acid elongation 2
bna01040 Biosynthesis of unsaturated fatty acids 2
bna01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
sot03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 3
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 2
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00062 Fatty acid elongation 6
osa04626 Plant-pathogen interaction 4
osa01040 Biosynthesis of unsaturated fatty acids 2
osa01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 4
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 2
tae04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00260 Glycine, serine and threonine metabolism 2
hvu00270 Cysteine and methionine metabolism 2
hvu01200 Carbon metabolism 2
hvu01230 Biosynthesis of amino acids 2
hvu00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100266564 100248336 100245249 817386 822310 834109 100815739 100816445 100820350 103864884 103854282 103836966 18098894 18107203 11408899 11432263 25492444 107961966 107940119 107962778 106446881 106446879 106391055 102607899 102626169 102611920 101252489 101259606 102588953 102585580 107764002 107791931 107808595 4337826 4347527 4348920 100280218 100274309 100274020 123104324 123181093 123112711 123425445 123431313 8070475 8069500 100844486 100822330
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