ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100255588	uncharacterized LOC100255588
vvi-r.5	100255588	uncharacterized LOC100255588
vvi-m.5	100255588	uncharacterized LOC100255588
ath-u.5	AT4G04180	P-loop containing nucleoside triphosphate hydrolases superfamily protein
gma-u.5	100806110	uncharacterized LOC100806110
gma-u.5	100803362	cell division control protein 48
bra-r.6	103839849	ATPase family gene 2 protein
ppo-u.5	18097305	uncharacterized LOC18097305
mtr-u.5	25486235	ATPase family protein 2 homolog
ghi-r.1	107962052	outer mitochondrial transmembrane helix translocase
ghi-r.1	107910051	outer mitochondrial transmembrane helix translocase
bna-r.1	106366910	probable 26S proteasome regulatory subunit 10B
bna-r.1	125606810	uncharacterized LOC125606810
cit-r.1	102613509	uncharacterized LOC102613509
sly-u.5	101260285	uncharacterized LOC101260285
sot-r.1	102603069	ATPase family AAA domain-containing protein 1-A
nta-r.1	107765965	uncharacterized LOC107765965
nta-r.1	107761354	uncharacterized LOC107761354
osa-u.5	4330676	uncharacterized LOC4330676
zma-u.5	100216753	katanin p60 ATPase-containing subunit A1
tae-r.2	123145534	cell division control protein 48 homolog C
tae-r.2	123138283	spastin
tae-r.2	123128413	katanin p60 ATPase-containing subunit A-like 1
hvu-r.1	123403879	fidgetin-like protein 1
sbi-r.1	8075731	katanin p60 ATPase-containing subunit A1
bdi-r.1	100829112	katanin p60 ATPase-containing subunit A-like 1
cre-r.1	CHLRE_17g726150v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process

(142 genes)

IEA

GO CC

GO:0008540 [list] [network] proteasome regulatory particle, base subcomplex

(16 genes)

IEA

GO MF

GO:0036402 [list] [network] proteasome-activating activity	(12 genes)	IEA
GO:0016887 [list] [network] ATP hydrolysis activity	(487 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2120 genes)	IEA

Protein

XP_002267342.3 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, mito 2

(predict for XP_002267342.3)

Subcellular
localization
TargetP

mito 8

(predict for XP_002267342.3)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100255588	vvi-r.5 for 100255588	vvi-m.5 for 100255588	ath-u.5 for AT4G04180	gma-u.5 for 100806110	gma-u.5 for 100803362	bra-r.6 for 103839849	ppo-u.5 for 18097305	mtr-u.5 for 25486235	ghi-r.1 for 107962052	ghi-r.1 for 107910051	bna-r.1 for 106366910	bna-r.1 for 125606810	cit-r.1 for 102613509	sly-u.5 for 101260285	sot-r.1 for 102603069	nta-r.1 for 107765965	nta-r.1 for 107761354	osa-u.5 for 4330676	zma-u.5 for 100216753	tae-r.2 for 123145534	tae-r.2 for 123138283	tae-r.2 for 123128413	hvu-r.1 for 123403879	sbi-r.1 for 8075731	bdi-r.1 for 100829112	cre-r.1 for CHLRE_17g726150v5

Ortholog

Ortholog ID: 9000

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC100255588

P-loop containing nucleoside triphosphate hydrolases superfamily protein

uncharacterized LOC100806110

cell division control protein 48

ATPase family gene 2 protein

uncharacterized LOC18097305

ATPase family protein 2 homolog

outer mitochondrial transmembrane helix translocase

uncharacterized LOC125606810

ATPase family gene 2 protein-like

uncharacterized LOC102613509

uncharacterized LOC101260285

ATPase family AAA domain-containing protein 1-A

uncharacterized LOC107765965

uncharacterized LOC107761354

uncharacterized LOC4330676

katanin p60 ATPase-containing subunit A1

cell division control protein 48 homolog C

spastin

katanin p60 ATPase-containing subunit A-like 1

fidgetin-like protein 1

katanin p60 ATPase-containing subunit A1

katanin p60 ATPase-containing subunit A-like 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03083	Polycomb repressive complex	2
gma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00562	Inositol phosphate metabolism	2
mtr04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2
ghi00290	Valine, leucine and isoleucine biosynthesis	2
ghi00660	C5-Branched dibasic acid metabolism	2
ghi01210	2-Oxocarboxylic acid metabolism	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2
ghi00290	Valine, leucine and isoleucine biosynthesis	2
ghi00660	C5-Branched dibasic acid metabolism	2
ghi01210	2-Oxocarboxylic acid metabolism	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03020	RNA polymerase	3
sot03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00053	Ascorbate and aldarate metabolism	2
nta04075	Plant hormone signal transduction	2
nta00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00053	Ascorbate and aldarate metabolism	2
nta04075	Plant hormone signal transduction	2
nta00531	Glycosaminoglycan degradation	2
nta00604	Glycosphingolipid biosynthesis - ganglio series	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03013	Nucleocytoplasmic transport	3
osa03015	mRNA surveillance pathway	3
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	3
tae03015	mRNA surveillance pathway	3
tae04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	3
tae03015	mRNA surveillance pathway	3
tae04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	3
tae00190	Oxidative phosphorylation	2
tae04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03440	Homologous recombination	2
bdi03460	Fanconi anemia pathway	2

Expression

Expression pattern

Entrez Gene ID^*

100255588

825733

100806110

100803362

103839849

18097305

25486235

107962052

107910051

125606810

106366129

102613509

101260285

102603069

107765965

107761354

4330676

100216753

123145534

123138283

123128413

123403879

8075731

100829112

5722785

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100255588 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100255588 (vvi-u.5 coexpression data)


Species	vvi	ath	gma	bra	ppo	mtr	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	1	2	1	1	1	2	2	1	1	1	2	1	1	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100255588 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100255588 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**