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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100256612   BRCT domain-containing protein At4g02110 
 vvi-r.5   100256612   BRCT domain-containing protein At4g02110 
 ath-u.5   AT1G67180   zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein 
 gma-u.5   100815034   uncharacterized LOC100815034 
 bra-r.6   103852378   uncharacterized LOC103852378 
 mtr-u.5   25495560   BRCT domain-containing protein At4g02110 
 ghi-r.1   107895317   uncharacterized LOC107895317 
 ghi-r.1   107918382   uncharacterized LOC107918382 
 bna-r.1   106391930   uncharacterized LOC106391930 
 sly-u.5   101255360   uncharacterized LOC101255360 
 sot-r.1   102595855   uncharacterized LOC102595855 
 nta-r.1   107772700   uncharacterized LOC107772700 
 nta-r.1   107805500   uncharacterized LOC107805500 
 osa-u.5   4345569   uncharacterized LOC4345569 
 osa-u.5   4351893   uncharacterized LOC4351893 
 zma-u.5   100273565   zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein 
 zma-u.5   100282613   ubiquitin-protein ligase/ zinc ion binding protein 
 tae-r.2   123186153   uncharacterized LOC123186153 
 tae-r.2   123179903   uncharacterized LOC123179903 
 tae-r.2   123103925   uncharacterized LOC123103925 
 hvu-r.1   123439439   uncharacterized LOC123439439 
 hvu-r.1   123442748   uncharacterized LOC123442748 
 sbi-r.1   8073547   BRCT domain-containing protein At4g02110 
 bdi-r.1   100840339   uncharacterized LOC100840339 

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Top 50 coexpressed genes to 100256612 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100256612 (vvi-u.5 coexpression data)

CoexMap"100256612"


vviLOC100256612 | Entrez gene ID : 100256612      
Species vvi ath gma bra mtr ghi bna sly sot nta osa zma tae hvu sbi bdi ppo cre cit
Paralog 2 1 1 1 1 2 1 1 1 2 2 2 3 2 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0046872 [list] [network] metal ion binding  (2138 genes)  IEA  
Protein XP_002279145.3 [sequence] [blastp]
XP_010660521.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  mito 2,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_002279145.3)
nucl 6,  chlo 3  (predict for XP_010660521.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for XP_002279145.3)
other 9  (predict for XP_010660521.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100256612
vvi-r.5
for
100256612
ath-u.5
for
AT1G67180
gma-u.5
for
100815034
bra-r.6
for
103852378
mtr-u.5
for
25495560
ghi-r.1
for
107895317
ghi-r.1
for
107918382
bna-r.1
for
106391930
sly-u.5
for
101255360
sot-r.1
for
102595855
nta-r.1
for
107772700
nta-r.1
for
107805500
osa-u.5
for
4345569
osa-u.5
for
4351893
zma-u.5
for
100273565
zma-u.5
for
100282613
tae-r.2
for
123186153
tae-r.2
for
123179903
tae-r.2
for
123103925
hvu-r.1
for
123439439
hvu-r.1
for
123442748
sbi-r.1
for
8073547
bdi-r.1
for
100840339


Ortholog ID: 9280
Species vvi ath gma bra mtr ghi ghi bna sly sot nta nta osa osa zma zma tae tae tae hvu hvu sbi bdi
Symbol LOC100256612 AT1G67180 LOC100815034 LOC103852378 LOC25495560 LOC107895317 LOC107918382 LOC106391930 LOC101255360 LOC102595855 LOC107772700 LOC107805500 LOC4345569 LOC4351893 LOC100273565 LOC100282613 LOC123186153 LOC123179903 LOC123103925 LOC123439439 LOC123442748 LOC8073547 LOC100840339
Function* BRCT domain-containing protein At4g02110 zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein uncharacterized LOC100815034 uncharacterized LOC103852378 BRCT domain-containing protein At4g02110 uncharacterized LOC107895317 uncharacterized LOC107918382 uncharacterized LOC106391930 uncharacterized LOC101255360 uncharacterized LOC102595855 uncharacterized LOC107772700 uncharacterized LOC107805500 uncharacterized LOC4345569 uncharacterized LOC4351893 zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein ubiquitin-protein ligase/ zinc ion binding protein uncharacterized LOC123186153 uncharacterized LOC123179903 uncharacterized LOC123103925 uncharacterized LOC123439439 uncharacterized LOC123442748 BRCT domain-containing protein At4g02110 uncharacterized LOC100840339
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 3
vvi03420 Nucleotide excision repair 3
vvi03410 Base excision repair 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03430 Mismatch repair 3
ath03440 Homologous recombination 3
ath03030 DNA replication 2
ath03420 Nucleotide excision repair 2
ath03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00240 Pyrimidine metabolism 3
gma01232 Nucleotide metabolism 3
gma03030 DNA replication 2
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 4
sot03430 Mismatch repair 2
sot03410 Base excision repair 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 4
nta04141 Protein processing in endoplasmic reticulum 2
nta00566 Sulfoquinovose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta00100 Steroid biosynthesis 2
nta00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 2
osa04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 2
tae03420 Nucleotide excision repair 2
tae03430 Mismatch repair 2
tae03440 Homologous recombination 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae03030 DNA replication 2
tae03420 Nucleotide excision repair 2
tae03430 Mismatch repair 2
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00270 Cysteine and methionine metabolism 2
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100256612 843038 100815034 103852378 25495560 107895317 107918382 106391930 101255360 102595855 107772700 107805500 4345569 4351893 100273565 100282613 123186153 123179903 123103925 123439439 123442748 8073547 100840339
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