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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100257098   double-stranded RNA-binding protein 4 
 vvi-r.5   100257098   double-stranded RNA-binding protein 4 
 vvi-m.5   100257098   double-stranded RNA-binding protein 4 
 gma-u.5   102664145   double-stranded RNA-binding protein 4 
 ppo-u.5   18099370   double-stranded RNA-binding protein 1 
 mtr-u.5   11430114   uncharacterized LOC11430114 
 mtr-u.5   25491216   double-stranded RNA-binding protein 3 
 ghi-r.1   107936205   double-stranded RNA-binding protein 4 
 ghi-r.1   107916726   double-stranded RNA-binding protein 4 
 cit-r.1   102607749   double-stranded RNA-binding protein 4-like 
 sly-u.5   101257125   double-stranded RNA-binding protein 4 
 sot-r.1   102594805   double-stranded RNA-binding protein 4-like 
 nta-r.1   107818223   double-stranded RNA-binding protein 7 
 osa-u.5   4345448   double-stranded RNA-binding protein 4-like 
 zma-u.5   100191297   uncharacterized LOC100191297 
 tae-r.2   123127213   double-stranded RNA-binding protein 4 
 tae-r.2   123136811   double-stranded RNA-binding protein 4 
 hvu-r.1   123402469   double-stranded RNA-binding protein 4-like 
 sbi-r.1   8070014   double-stranded RNA-binding protein 4 
 bdi-r.1   100834719   double-stranded RNA-binding protein 4 

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Top 50 coexpressed genes to 100257098 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100257098 (vvi-u.5 coexpression data)

CoexMap"100257098"


vviLOC100257098 | Entrez gene ID : 100257098      
Species vvi gma ppo mtr ghi cit sly sot nta osa zma tae hvu sbi bdi bra bna cre ath
Paralog 3 1 1 2 2 1 1 1 1 1 1 2 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006364 [list] [network] rRNA processing  (198 genes)  IEA  
GO:0010468 [list] [network] regulation of gene expression  (1612 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2597 genes)  IEA  
GO MF
GO:0004525 [list] [network] ribonuclease III activity  (11 genes)  IEA  
GO:0003725 [list] [network] double-stranded RNA binding  (13 genes)  IEA  
Protein XP_010660325.1 [sequence] [blastp]
XP_010660326.1 [sequence] [blastp]
XP_010660327.1 [sequence] [blastp]
XP_010660328.1 [sequence] [blastp]
XP_010660329.1 [sequence] [blastp]
XP_010660330.1 [sequence] [blastp]
XP_059598456.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 2,  cyto_pero 2,  cyto_E.R. 2  (predict for XP_010660325.1)
cyto 4,  nucl 2,  cyto_pero 2,  cyto_E.R. 2  (predict for XP_010660326.1)
cyto 4,  nucl 2,  cyto_pero 2,  cyto_E.R. 2  (predict for XP_010660327.1)
cyto 4,  nucl 2,  cyto_pero 2,  cyto_E.R. 2  (predict for XP_010660328.1)
chlo 4,  nucl 3,  cyto 1,  nucl_plas 1  (predict for XP_010660329.1)
nucl 4,  cyto 4,  chlo 1,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_010660330.1)
nucl 4,  chlo 4,  cyto 1  (predict for XP_059598456.1)
Subcellular
localization
TargetP
other 5,  chlo 4  (predict for XP_010660325.1)
other 5,  chlo 4  (predict for XP_010660326.1)
other 5,  chlo 4  (predict for XP_010660327.1)
other 5,  chlo 4  (predict for XP_010660328.1)
other 5,  chlo 4  (predict for XP_010660329.1)
other 5,  chlo 4  (predict for XP_010660330.1)
other 5,  chlo 4  (predict for XP_059598456.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100257098
vvi-r.5
for
100257098
vvi-m.5
for
100257098
gma-u.5
for
102664145
ppo-u.5
for
18099370
mtr-u.5
for
11430114
mtr-u.5
for
25491216
ghi-r.1
for
107936205
ghi-r.1
for
107916726
cit-r.1
for
102607749
sly-u.5
for
101257125
sot-r.1
for
102594805
nta-r.1
for
107818223
osa-u.5
for
4345448
zma-u.5
for
100191297
tae-r.2
for
123127213
tae-r.2
for
123136811
hvu-r.1
for
123402469
sbi-r.1
for
8070014
bdi-r.1
for
100834719


Ortholog ID: 6766
Species vvi gma ppo mtr mtr ghi ghi cit sly nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC100257098 LOC100798730 LOC18099370 LOC11430114 LOC25491216 LOC107936205 LOC107916726 LOC102607749 LOC101257125 LOC107818223 LOC107795519 LOC4345448 LOC100191297 LOC123127213 LOC123136811 LOC123144295 LOC123402469 LOC8070014 LOC100834719
Function* double-stranded RNA-binding protein 4 double-stranded RNA-binding protein 4 double-stranded RNA-binding protein 1 uncharacterized LOC11430114 double-stranded RNA-binding protein 3 double-stranded RNA-binding protein 4 double-stranded RNA-binding protein 4 double-stranded RNA-binding protein 4-like double-stranded RNA-binding protein 4 double-stranded RNA-binding protein 7 double-stranded RNA-binding protein 4 double-stranded RNA-binding protein 4-like uncharacterized LOC100191297 double-stranded RNA-binding protein 4 double-stranded RNA-binding protein 4 double-stranded RNA-binding protein 4 double-stranded RNA-binding protein 4-like double-stranded RNA-binding protein 4 double-stranded RNA-binding protein 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00220 Arginine biosynthesis 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 2
bdi03420 Nucleotide excision repair 2
bdi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100257098 100798730 18099370 11430114 25491216 107936205 107916726 102607749 101257125 107818223 107795519 4345448 100191297 123127213 123136811 123144295 123402469 8070014 100834719
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