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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100257120   root phototropism protein 2 
 vvi-r.5   100257120   root phototropism protein 2 
 vvi-m.5   100257120   root phototropism protein 2 
 ath-u.5   RPT2   Phototropic-responsive NPH3 family protein 
 gma-u.5   100798837   root phototropism protein 2 
 gma-u.5   100782043   root phototropism protein 2 
 gma-u.5   100776768   root phototropism protein 2 
 bra-r.6   103867951   root phototropism protein 2 
 bra-r.6   103857325   root phototropism protein 2 
 ppo-u.5   7494653   root phototropism protein 2 
 ppo-u.5   7464743   root phototropism protein 2 
 mtr-u.5   11431596   root phototropism protein 2 
 mtr-u.5   11441121   root phototropism protein 2 
 ghi-r.1   107933793   root phototropism protein 2 
 ghi-r.1   107893717   root phototropism protein 2 
 bna-r.1   111215603   root phototropism protein 2 
 bna-r.1   106451417   root phototropism protein 2 
 bna-r.1   106437587   root phototropism protein 2-like 
 cit-r.1   102624352   root phototropism protein 2 
 sly-u.5   101259171   root phototropism protein 2 
 sot-r.1   102602517   root phototropism protein 2 
 nta-r.1   107786260   root phototropism protein 2 
 nta-r.1   107799631   root phototropism protein 2-like 
 osa-u.5   4349616   root phototropism protein 2 
 osa-u.5   4351333   root phototropism protein 2 
 zma-u.5   100281201   uncharacterized LOC100281201 
 zma-u.5   103647148   root phototropism protein 2 
 tae-r.2   123086450   root phototropism protein 2 
 tae-r.2   123091549   root phototropism protein 2 
 tae-r.2   123096504   root phototropism protein 2 
 hvu-r.1   123448085   root phototropism protein 2 
 sbi-r.1   8083016   root phototropism protein 2 
 sbi-r.1   8067165   root phototropism protein 2 
 bdi-r.1   100831993   root phototropism protein 2 

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Top 50 coexpressed genes to 100257120 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100257120 (vvi-u.5 coexpression data)

CoexMap"100257120"


vviLOC100257120 | Entrez gene ID : 100257120      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 3 2 2 2 2 3 1 1 1 2 2 2 3 1 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002264896.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  E.R. 2,  nucl 1,  mito 1,  E.R._plas 1  (predict for XP_002264896.1)
Subcellular
localization
TargetP
mito 4,  other 3  (predict for XP_002264896.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100257120
vvi-r.5
for
100257120
vvi-m.5
for
100257120
ath-u.5
for
RPT2
gma-u.5
for
100798837
gma-u.5
for
100782043
gma-u.5
for
100776768
bra-r.6
for
103867951
bra-r.6
for
103857325
ppo-u.5
for
7494653
ppo-u.5
for
7464743
mtr-u.5
for
11431596
mtr-u.5
for
11441121
ghi-r.1
for
107933793
ghi-r.1
for
107893717
bna-r.1
for
111215603
bna-r.1
for
106451417
bna-r.1
for
106437587
cit-r.1
for
102624352
sly-u.5
for
101259171
sot-r.1
for
102602517
nta-r.1
for
107786260
nta-r.1
for
107799631
osa-u.5
for
4349616
osa-u.5
for
4351333
zma-u.5
for
100281201
zma-u.5
for
103647148
tae-r.2
for
123086450
tae-r.2
for
123091549
tae-r.2
for
123096504
hvu-r.1
for
123448085
sbi-r.1
for
8083016
sbi-r.1
for
8067165
bdi-r.1
for
100831993


Ortholog ID: 5960
Species vvi ath gma gma gma bra bra ppo ppo mtr mtr ghi ghi bna bna bna cit sly sot nta nta osa osa zma zma tae tae tae hvu sbi sbi bdi
Symbol LOC100257120 RPT2 LOC100798837 LOC100776768 LOC100127361 LOC103867951 LOC103857325 LOC7494653 LOC7464743 LOC11431596 LOC11441121 LOC107933793 LOC107893717 LOC106451417 LOC106437587 LOC106388080 LOC102624352 LOC101259171 LOC102602517 LOC107786260 LOC107799631 LOC4349616 LOC4351333 LOC100281201 LOC103647148 LOC123086450 LOC123091549 LOC123096504 LOC123448085 LOC8083016 LOC8067165 LOC100831993
Function* root phototropism protein 2 Phototropic-responsive NPH3 family protein root phototropism protein 2 root phototropism protein 2 root phototropism protein 2-like root phototropism protein 2 root phototropism protein 2 root phototropism protein 2 root phototropism protein 2 root phototropism protein 2 root phototropism protein 2 root phototropism protein 2 root phototropism protein 2 root phototropism protein 2 root phototropism protein 2-like root phototropism protein 2-like root phototropism protein 2 root phototropism protein 2 root phototropism protein 2 root phototropism protein 2 root phototropism protein 2-like root phototropism protein 2 root phototropism protein 2 uncharacterized LOC100281201 root phototropism protein 2 root phototropism protein 2 root phototropism protein 2 root phototropism protein 2 root phototropism protein 2 root phototropism protein 2 root phototropism protein 2 root phototropism protein 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 2
gma04141 Protein processing in endoplasmic reticulum 2
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00906 Carotenoid biosynthesis 2
ppo00710 Carbon fixation by Calvin cycle 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00196 Photosynthesis - antenna proteins 5
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00196 Photosynthesis - antenna proteins 5
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 3
cit04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100257120 817601 100798837 100776768 100127361 103867951 103857325 7494653 7464743 11431596 11441121 107933793 107893717 106451417 106437587 106388080 102624352 101259171 102602517 107786260 107799631 4349616 4351333 100281201 103647148 123086450 123091549 123096504 123448085 8083016 8067165 100831993
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