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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100257580   nuclear pore complex protein GP210 
 vvi-r.5   100257580   nuclear pore complex protein GP210 
 vvi-m.5   100257580   nuclear pore complex protein GP210 
 ath-u.5   EMB3012   embryo defective 3012 
 gma-u.5   100778001   nuclear pore complex protein GP210 
 ppo-u.5   18095321   nuclear pore complex protein GP210 
 mtr-u.5   25495140   nuclear pore complex protein GP210 
 sly-u.5   101260108   nuclear pore complex protein GP210 
 osa-u.5   4347873   nuclear pore complex protein GP210 
 zma-u.5   100384390   uncharacterized LOC100384390 

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Top 50 coexpressed genes to 100257580 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100257580 (vvi-u.5 coexpression data)

CoexMap"100257580"


vviLOC100257580 | Entrez gene ID : 100257580    
Species vvi ath gma ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi03013 [list] [network] Nucleocytoplasmic transport (98 genes)
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
Protein XP_059598646.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 2,  chlo 1,  plas 1,  cyto_pero 1  (predict for XP_059598646.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_059598646.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100257580

.
vvi-r.5
for
100257580

.
vvi-m.5
for
100257580

.
ath-u.5
for
EMB3012

.
gma-u.5
for
100778001

.
ppo-u.5
for
18095321

.
mtr-u.5
for
25495140

.
sly-u.5
for
101260108

.
osa-u.5
for
4347873

.
zma-u.5
for
100384390

.


Ortholog ID: 11429
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol EMB3012 LOC100778001 LOC101260108 LOC4347873 LOC100384390 LOC103850178 LOC100257580 LOC18095321 LOC25495140 LOC123104875 LOC123113161 LOC123452067 LOC107892253 LOC107892125 LOC106352690 LOC106405701 LOC8061681 LOC102591106 LOC102617045 LOC100821041 LOC107814409 LOC107797811
Function* embryo defective 3012 nuclear pore complex protein GP210 nuclear pore complex protein GP210 nuclear pore complex protein GP210 uncharacterized LOC100384390 nuclear pore complex protein GP210 nuclear pore complex protein GP210 nuclear pore complex protein GP210 nuclear pore complex protein GP210 nuclear pore complex protein GP210 nuclear pore complex protein GP210 nuclear pore complex protein GP210 nuclear pore complex protein GP210 nuclear pore complex protein GP210 nuclear pore complex protein GP210-like nuclear pore complex protein GP210 nuclear pore complex protein GP210 nuclear pore complex protein GP210 nuclear pore complex protein GP210 nuclear pore complex protein GP210 nuclear pore complex protein GP210-like nuclear pore complex protein GP210
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 5
ath03008 Ribosome biogenesis in eukaryotes 2
ath03020 RNA polymerase 2
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 4
sly03008 Ribosome biogenesis in eukaryotes 3
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03008 Ribosome biogenesis in eukaryotes 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 5
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03013 Nucleocytoplasmic transport 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 4
vvi03015 mRNA surveillance pathway 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 3
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 3
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae03013 Nucleocytoplasmic transport 4
tae03018 RNA degradation 3
tae00780 Biotin metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03013 Nucleocytoplasmic transport 5
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 5
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 6
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03440 Homologous recombination 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 6
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03440 Homologous recombination 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 3
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834046 100778001 101260108 4347873 100384390 103850178 100257580 18095321 25495140 123104875 123113161 123452067 107892253 107892125 106352690 106405701 8061681 102591106 102617045 100821041 107814409 107797811
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