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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100258898   protein SPA1-RELATED 3 
 vvi-r.5   100258898   protein SPA1-RELATED 3 
 vvi-m.5   100258898   protein SPA1-RELATED 3 
 vvi-u.5   100253988   protein SPA1-RELATED 4 
 ath-u.5   SPA3   SPA1-related 3 
 ath-u.5   SPA4   SPA1-related 4 
 gma-u.5   100809718   protein SPA1-RELATED 3 
 gma-u.5   100784064   protein SPA1-RELATED 3 
 gma-u.5   100813635   protein SPA1-RELATED 3 
 bra-r.6   103869936   protein SPA1-RELATED 3 
 bra-r.6   103868459   protein SPA1-RELATED 4 
 bra-r.6   103840863   protein SPA1-RELATED 3 
 ppo-u.5   7460821   protein SPA1-RELATED 3 
 ppo-u.5   18095578   protein SPA1-RELATED 3 
 mtr-u.5   11411033   protein SPA1-RELATED 3 
 ghi-r.1   107889384   protein SPA1-RELATED 3 
 ghi-r.1   107902594   protein SPA1-RELATED 3 
 ghi-r.1   121223434   protein SPA1-RELATED 3-like 
 bna-r.1   106410825   protein SPA1-RELATED 4-like 
 bna-r.1   106405808   protein SPA1-RELATED 3 
 bna-r.1   106349428   protein SPA1-RELATED 3 
 cit-r.1   102627009   protein SPA1-RELATED 3 
 sly-u.5   101249991   protein SPA1-RELATED 4-like 
 sly-u.5   101256107   protein SPA1-RELATED 4-like 
 sot-r.1   102587101   protein SPA1-RELATED 4-like 
 sot-r.1   102590416   protein SPA1-RELATED 4-like 
 nta-r.1   107759187   protein SPA1-RELATED 3 
 nta-r.1   107768013   protein SPA1-RELATED 4 
 nta-r.1   107827325   protein SPA1-RELATED 3 
 osa-u.5   4324727   protein SPA1-RELATED 4 
 zma-u.5   103636244   protein SPA1-RELATED 4 
 zma-u.5   103651250   protein SPA1-RELATED 4 
 tae-r.2   123079128   protein SPA1-RELATED 3 
 tae-r.2   123070723   protein SPA1-RELATED 3 
 tae-r.2   123062017   protein SPA1-RELATED 4 
 hvu-r.1   123444323   protein SPA1-RELATED 4-like 
 sbi-r.1   8059209   protein SPA1-RELATED 4 
 bdi-r.1   100833269   protein SPA1-RELATED 4 

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Top 50 coexpressed genes to 100258898 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100258898 (vvi-u.5 coexpression data)

CoexMap"100258898"


vviLOC100258898 | Entrez gene ID : 100258898      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 2 1 3 3 1 2 2 3 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi04712 [list] [network] Circadian rhythm - plant (44 genes)
GO BP
GO:0009640 [list] [network] photomorphogenesis  (12 genes)  IEA  
GO:0006468 [list] [network] protein phosphorylation  (1262 genes)  IEA  
GO CC
GO MF
GO:0004672 [list] [network] protein kinase activity  (1297 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2120 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002282441.3 [sequence] [blastp]
XP_010644194.1 [sequence] [blastp]
XP_059591161.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 2,  chlo 1,  cysk 1  (predict for XP_002282441.3)
nucl 5,  cyto 2,  chlo 1,  cysk 1  (predict for XP_010644194.1)
nucl 5,  cyto 2,  chlo 1,  cysk 1  (predict for XP_059591161.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_002282441.3)
chlo 4  (predict for XP_010644194.1)
chlo 4  (predict for XP_059591161.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100258898
vvi-r.5
for
100258898
vvi-m.5
for
100258898
vvi-u.5
for
100253988
ath-u.5
for
SPA3
ath-u.5
for
SPA4
gma-u.5
for
100809718
gma-u.5
for
100784064
gma-u.5
for
100813635
bra-r.6
for
103869936
bra-r.6
for
103868459
bra-r.6
for
103840863
ppo-u.5
for
7460821
ppo-u.5
for
18095578
mtr-u.5
for
11411033
ghi-r.1
for
107889384
ghi-r.1
for
107902594
ghi-r.1
for
121223434
bna-r.1
for
106410825
bna-r.1
for
106405808
bna-r.1
for
106349428
cit-r.1
for
102627009
sly-u.5
for
101249991
sly-u.5
for
101256107
sot-r.1
for
102587101
sot-r.1
for
102590416
nta-r.1
for
107759187
nta-r.1
for
107768013
nta-r.1
for
107827325
osa-u.5
for
4324727
zma-u.5
for
103636244
zma-u.5
for
103651250
tae-r.2
for
123079128
tae-r.2
for
123070723
tae-r.2
for
123062017
hvu-r.1
for
123444323
sbi-r.1
for
8059209
bdi-r.1
for
100833269


Ortholog ID: 4906
Species vvi vvi ath ath gma gma gma bra bra bra ppo ppo mtr ghi ghi ghi bna bna bna cit sly sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC100258898 LOC100253988 SPA3 SPA4 LOC100784064 LOC100813635 LOC100811457 LOC103869936 LOC103868459 LOC103840863 LOC7460821 LOC18095578 LOC11411033 LOC107889384 LOC107902594 LOC121223434 LOC106410825 LOC106349428 LOC106400599 LOC102627009 LOC101249991 LOC101256107 LOC102587101 LOC102590416 LOC107759187 LOC107768013 LOC107827325 LOC4324727 LOC103636244 LOC103651250 LOC123079128 LOC123070723 LOC123062017 LOC123444323 LOC8059209 LOC100833269
Function* protein SPA1-RELATED 3 protein SPA1-RELATED 4 SPA1-related 3 SPA1-related 4 protein SPA1-RELATED 3 protein SPA1-RELATED 3 protein SPA1-RELATED 3 protein SPA1-RELATED 3 protein SPA1-RELATED 4 protein SPA1-RELATED 3 protein SPA1-RELATED 3 protein SPA1-RELATED 3 protein SPA1-RELATED 3 protein SPA1-RELATED 3 protein SPA1-RELATED 3 protein SPA1-RELATED 3-like protein SPA1-RELATED 4-like protein SPA1-RELATED 3 protein SPA1-RELATED 3-like protein SPA1-RELATED 3 protein SPA1-RELATED 4-like protein SPA1-RELATED 4-like protein SPA1-RELATED 4-like protein SPA1-RELATED 4-like protein SPA1-RELATED 3 protein SPA1-RELATED 4 protein SPA1-RELATED 3 protein SPA1-RELATED 4 protein SPA1-RELATED 4 protein SPA1-RELATED 4 protein SPA1-RELATED 3 protein SPA1-RELATED 3 protein SPA1-RELATED 4 protein SPA1-RELATED 4-like protein SPA1-RELATED 4 protein SPA1-RELATED 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 5
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
ath00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00906 Carotenoid biosynthesis 2
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00380 Tryptophan metabolism 2
bra00460 Cyanoamino acid metabolism 2
bra00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 5
tae00073 Cutin, suberine and wax biosynthesis 3
tae00561 Glycerolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00010 Glycolysis / Gluconeogenesis 2
hvu01200 Carbon metabolism 2
hvu03420 Nucleotide excision repair 2
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100258898 100253988 820767 841743 100784064 100813635 100811457 103869936 103868459 103840863 7460821 18095578 11411033 107889384 107902594 121223434 106410825 106349428 106400599 102627009 101249991 101256107 102587101 102590416 107759187 107768013 107827325 4324727 103636244 103651250 123079128 123070723 123062017 123444323 8059209 100833269
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