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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100259860   metal-nicotianamine transporter YSL1 
 vvi-r.5   100259860   metal-nicotianamine transporter YSL1 
 vvi-m.5   100259860   metal-nicotianamine transporter YSL1 
 vvi-u.5   100255514   metal-nicotianamine transporter YSL3 
 vvi-u.5   VVYS1   YS1-like protein-like 
 ath-u.5   YSL1   YELLOW STRIPE like 1 
 ath-u.5   YSL2   YELLOW STRIPE like 2 
 ath-u.5   YSL3   YELLOW STRIPE like 3 
 gma-u.5   100785643   metal-nicotianamine transporter YSL1 
 gma-u.5   100795669   metal-nicotianamine transporter YSL3 
 gma-u.5   100797196   metal-nicotianamine transporter YSL3 
 bra-r.6   103834971   metal-nicotianamine transporter YSL1 
 bra-r.6   103861748   metal-nicotianamine transporter YSL1 
 bra-r.6   103844830   metal-nicotianamine transporter YSL3 
 ppo-u.5   7477824   metal-nicotianamine transporter YSL1 
 ppo-u.5   7464319   metal-nicotianamine transporter YSL3 
 mtr-u.5   112418699   metal-nicotianamine transporter YSL3 
 mtr-u.5   120579424   metal-nicotianamine transporter YSL3 
 mtr-u.5   11430554   metal-nicotianamine transporter YSL3 
 ghi-r.1   107950728   metal-nicotianamine transporter YSL1 
 ghi-r.1   107950354   metal-nicotianamine transporter YSL3 
 ghi-r.1   107928753   metal-nicotianamine transporter YSL3 
 bna-r.1   106348262   metal-nicotianamine transporter YSL2 
 bna-r.1   106412086   metal-nicotianamine transporter YSL2 
 bna-r.1   106376339   metal-nicotianamine transporter YSL1-like 
 cit-r.1   102625694   metal-nicotianamine transporter YSL3 
 cit-r.1   102611379   metal-nicotianamine transporter YSL1 
 sly-u.5   101265663   metal-nicotianamine transporter YSL1 
 sly-u.5   101256566   metal-nicotianamine transporter YSL2 
 sot-r.1   102591089   metal-nicotianamine transporter YSL1 
 sot-r.1   102599824   metal-nicotianamine transporter YSL3-like 
 nta-r.1   107809665   metal-nicotianamine transporter YSL2-like 
 nta-r.1   107770503   metal-nicotianamine transporter YSL3 
 nta-r.1   107784854   metal-nicotianamine transporter YSL1 
 osa-u.5   4330161   metal-nicotianamine transporter YSL2-like 
 osa-u.5   4336545   probable metal-nicotianamine transporter YSL9 
 osa-u.5   4336546   probable metal-nicotianamine transporter YSL16 
 zma-u.5   541800   yellow stripe 1 
 zma-u.5   100382320   Metal-nicotianamine transporter YSL2 
 zma-u.5   100273385   uncharacterized LOC100273385 
 tae-r.2   123054061   probable metal-nicotianamine transporter YSL9 
 tae-r.2   123054062   probable metal-nicotianamine transporter YSL9 
 tae-r.2   123046187   probable metal-nicotianamine transporter YSL16 
 hvu-r.1   123427391   probable metal-nicotianamine transporter YSL16 
 hvu-r.1   123427390   probable metal-nicotianamine transporter YSL9 
 hvu-r.1   123427389   probable metal-nicotianamine transporter YSL9 
 sbi-r.1   8075150   iron-phytosiderophore transporter yellow stripe 1 
 sbi-r.1   8075151   iron-phytosiderophore transporter yellow stripe 1 
 sbi-r.1   110436394   probable metal-nicotianamine transporter YSL16 
 bdi-r.1   YS1A   iron-phytosiderophore transporter YSL15-like 
 bdi-r.1   100830952   metal-nicotianamine transporter YSL2 

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Top 50 coexpressed genes to 100259860 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100259860 (vvi-u.5 coexpression data)

CoexMap"100259860"


vviLOC100259860 | Entrez gene ID : 100259860    
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 3 3 3 2 3 3 3 2 2 2 3 3 3 3 3 3 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010039 [list] [network] response to iron ion  (3 genes)  IEA  
GO:0048316 [list] [network] seed development  (26 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (987 genes)  IEA  
GO MF
GO:0051980 [list] [network] iron-nicotianamine transmembrane transporter activity  (3 genes)  IEA  
GO:0035673 [list] [network] oligopeptide transmembrane transporter activity  (44 genes)  IEA  
Protein XP_059598713.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 8,  E.R. 1  (predict for XP_059598713.1)
Subcellular
localization
TargetP
other 9  (predict for XP_059598713.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100259860
vvi-r.5
for
100259860
vvi-m.5
for
100259860
vvi-u.5
for
100255514
vvi-u.5
for
VVYS1
ath-u.5
for
YSL1
ath-u.5
for
YSL2
ath-u.5
for
YSL3
gma-u.5
for
100785643
gma-u.5
for
100795669
gma-u.5
for
100797196
bra-r.6
for
103834971
bra-r.6
for
103861748
bra-r.6
for
103844830
ppo-u.5
for
7477824
ppo-u.5
for
7464319
mtr-u.5
for
112418699
mtr-u.5
for
120579424
mtr-u.5
for
11430554
ghi-r.1
for
107950728
ghi-r.1
for
107950354
ghi-r.1
for
107928753
bna-r.1
for
106348262
bna-r.1
for
106412086
bna-r.1
for
106376339
cit-r.1
for
102625694
cit-r.1
for
102611379
sly-u.5
for
101265663
sly-u.5
for
101256566
sot-r.1
for
102591089
sot-r.1
for
102599824
nta-r.1
for
107809665
nta-r.1
for
107770503
nta-r.1
for
107784854
osa-u.5
for
4330161
osa-u.5
for
4336545
osa-u.5
for
4336546
zma-u.5
for
541800
zma-u.5
for
100382320
zma-u.5
for
100273385
tae-r.2
for
123054061
tae-r.2
for
123054062
tae-r.2
for
123046187
hvu-r.1
for
123427391
hvu-r.1
for
123427390
hvu-r.1
for
123427389
sbi-r.1
for
8075150
sbi-r.1
for
8075151
sbi-r.1
for
110436394
bdi-r.1
for
YS1A
bdi-r.1
for
100830952


Ortholog ID: 1130
Species vvi vvi vvi ath ath ath gma gma gma bra bra bra ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit sly sly sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi
Symbol LOC100259860 LOC100255514 VVYS1 YSL1 YSL2 YSL3 LOC100795669 LOC100797196 LOC100807763 LOC103834971 LOC103861463 LOC103874307 LOC7477824 LOC7464319 LOC120579424 LOC25484564 LOC11437925 LOC107950728 LOC107950354 LOC121213573 LOC106412086 LOC106376012 LOC106415424 LOC102625694 LOC102611379 LOC101265663 LOC101256566 LOC102591089 LOC102599824 LOC107809665 LOC107770503 LOC107784854 LOC4336545 LOC4336546 LOC9268232 LOC541800 LOC100382320 LOC100273385 LOC123046187 LOC123046180 LOC123144965 LOC123427390 LOC123427389 LOC123412249 LOC8075150 LOC110436394 LOC8083338 YS1A LOC100839579
Function* metal-nicotianamine transporter YSL1 metal-nicotianamine transporter YSL3 YS1-like protein-like YELLOW STRIPE like 1 YELLOW STRIPE like 2 YELLOW STRIPE like 3 metal-nicotianamine transporter YSL3 metal-nicotianamine transporter YSL3 metal-nicotianamine transporter YSL1 metal-nicotianamine transporter YSL1 metal-nicotianamine transporter YSL1-like metal-nicotianamine transporter YSL2 metal-nicotianamine transporter YSL1 metal-nicotianamine transporter YSL3 metal-nicotianamine transporter YSL3 metal-nicotianamine transporter YSL1 metal-nicotianamine transporter YSL3 metal-nicotianamine transporter YSL1 metal-nicotianamine transporter YSL3 metal-nicotianamine transporter YSL1 metal-nicotianamine transporter YSL2 metal-nicotianamine transporter YSL1 metal-nicotianamine transporter YSL1-like metal-nicotianamine transporter YSL3 metal-nicotianamine transporter YSL1 metal-nicotianamine transporter YSL1 metal-nicotianamine transporter YSL2 metal-nicotianamine transporter YSL1 metal-nicotianamine transporter YSL3-like metal-nicotianamine transporter YSL2-like metal-nicotianamine transporter YSL3 metal-nicotianamine transporter YSL1 probable metal-nicotianamine transporter YSL9 probable metal-nicotianamine transporter YSL16 iron-phytosiderophore transporter YSL15-like yellow stripe 1 Metal-nicotianamine transporter YSL2 uncharacterized LOC100273385 probable metal-nicotianamine transporter YSL16 probable metal-nicotianamine transporter YSL9 metal-nicotianamine transporter YSL2 probable metal-nicotianamine transporter YSL9 probable metal-nicotianamine transporter YSL9 iron-phytosiderophore transporter YSL15-like iron-phytosiderophore transporter yellow stripe 1 probable metal-nicotianamine transporter YSL16 probable metal-nicotianamine transporter YSL9 iron-phytosiderophore transporter YSL15-like probable metal-nicotianamine transporter YSL9
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00600 Sphingolipid metabolism 2
vvi00603 Glycosphingolipid biosynthesis - globo and isoglobo series 2
vvi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 5
ath00053 Ascorbate and aldarate metabolism 2
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 2
bra04120 Ubiquitin mediated proteolysis 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04517 IgSF CAM signaling 2
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04517 IgSF CAM signaling 2
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 2
sot00250 Alanine, aspartate and glutamate metabolism 2
sot00410 beta-Alanine metabolism 2
sot00430 Taurine and hypotaurine metabolism 2
sot00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00999 Biosynthesis of various plant secondary metabolites 3
osa00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 2
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00240 Pyrimidine metabolism 3
tae00410 beta-Alanine metabolism 3
tae00770 Pantothenate and CoA biosynthesis 3
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04142 Lysosome 2
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00904 Diterpenoid biosynthesis 5
hvu04016 MAPK signaling pathway - plant 2
hvu04075 Plant hormone signal transduction 2
hvu04626 Plant-pathogen interaction 2
hvu00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 4
sbi00500 Starch and sucrose metabolism 3
sbi00561 Glycerolipid metabolism 2
sbi04626 Plant-pathogen interaction 2
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 4
bdi00190 Oxidative phosphorylation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100259860 100255514 100233121 828512 832509 835437 100795669 100797196 100807763 103834971 103861463 103874307 7477824 7464319 120579424 25484564 11437925 107950728 107950354 121213573 106412086 106376012 106415424 102625694 102611379 101265663 101256566 102591089 102599824 107809665 107770503 107784854 4336545 4336546 9268232 541800 100382320 100273385 123046187 123046180 123144965 123427390 123427389 123412249 8075150 110436394 8083338 100838481 100839579
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