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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100259931   pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic-like 
 vvi-r.5   100259931   pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic-like 
 vvi-u.5   100250049   pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic 
 ath-u.5   AT2G34590   Transketolase family protein 
 ath-u.5   PDH-E1 BETA   pyruvate dehydrogenase E1 beta 
 gma-u.5   100811513   pyruvate dehydrogenase E1 component subunit beta 
 gma-u.5   100798407   pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic 
 gma-u.5   100787512   pyruvate dehydrogenase E1 component subunit beta-like 
 ppo-u.5   7482443   pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic 
 ppo-u.5   7472564   pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic 
 mtr-u.5   11411402   pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic 
 mtr-u.5   120577439   pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic 
 sly-u.5   101268205   pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic-like 
 sly-u.5   101252977   pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic-like 
 osa-u.5   4333564   pyruvate dehydrogenase E1 component subunit beta-4, chloroplastic-like 
 osa-u.5   4352803   pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic-like 
 zma-u.5   100284103   pyruvate dehydrogenase E1 component subunit beta 
 zma-u.5   100282233   uncharacterized LOC100282233 

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Top 50 coexpressed genes to 100259931 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100259931 (vvi-u.5 coexpression data)

CoexMap"100259931"


vviLOC100259931 | Entrez gene ID : 100259931    
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 2 3 2 2 2 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi00010 [list] [network] Glycolysis / Gluconeogenesis (119 genes)
vvi00020 [list] [network] Citrate cycle (TCA cycle) (51 genes)
vvi00620 [list] [network] Pyruvate metabolism (103 genes)
vvi00785 [list] [network] Lipoic acid metabolism (31 genes)
vvi01200 [list] [network] Carbon metabolism (253 genes)
vvi01210 [list] [network] 2-Oxocarboxylic acid metabolism (81 genes)
GO BP
GO:0006086 [list] [network] pyruvate decarboxylation to acetyl-CoA  (12 genes)  IEA  
GO CC
GO MF
GO:0004739 [list] [network] pyruvate dehydrogenase (acetyl-transferring) activity  (7 genes)  IEA  
Protein XP_003633031.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_003633031.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003633031.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100259931
vvi-r.5
for
100259931
vvi-u.5
for
100250049
ath-u.5
for
AT2G34590
ath-u.5
for
PDH-E1 BETA
gma-u.5
for
100811513
gma-u.5
for
100798407
gma-u.5
for
100787512
ppo-u.5
for
7482443
ppo-u.5
for
7472564
mtr-u.5
for
11411402
mtr-u.5
for
120577439
sly-u.5
for
101268205
sly-u.5
for
101252977
osa-u.5
for
4333564
osa-u.5
for
4352803
zma-u.5
for
100284103
zma-u.5
for
100282233


Ortholog ID: 3560
Species vvi vvi ath ath gma gma bra bra ppo ppo mtr mtr ghi ghi bna bna cit sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC100259931 LOC100250049 AT2G34590 PDH-E1 BETA LOC100780826 LOC100787512 LOC103835237 LOC103840432 LOC7482443 LOC7472564 LOC120577439 LOC11411402 LOC107905888 LOC107913605 LOC106361600 LOC106375942 LOC102610434 LOC101252977 LOC101268205 LOC102588815 LOC102604284 LOC107763479 LOC107818291 LOC4352803 LOC4333564 LOC100282233 LOC100284103 LOC123122721 LOC123110244 LOC123395946 LOC123452111 LOC8062209 LOC8084420 LOC100827441 LOC100835788 CHLRE_03g194200v5
Function* pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic-like pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic Transketolase family protein pyruvate dehydrogenase E1 beta pyruvate dehydrogenase E1 component subunit beta-like pyruvate dehydrogenase E1 component subunit beta-like pyruvate dehydrogenase E1 component subunit beta-2, chloroplastic pyruvate dehydrogenase E1 component subunit beta-2, chloroplastic pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic pyruvate dehydrogenase E1 component subunit beta-2, chloroplastic-like pyruvate dehydrogenase E1 component subunit beta-2, chloroplastic pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic-like pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic-like pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic-like pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic-like pyruvate dehydrogenase E1 component subunit beta-4, chloroplastic-like uncharacterized LOC100282233 pyruvate dehydrogenase E1 component subunit beta pyruvate dehydrogenase E1 component subunit beta-4, chloroplastic pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic-like pyruvate dehydrogenase E1 component subunit beta-4, chloroplastic pyruvate dehydrogenase E1 component subunit beta-4, chloroplastic pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic pyruvate dehydrogenase E1 component subunit beta-4, chloroplastic pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00061 Fatty acid biosynthesis 6
vvi01212 Fatty acid metabolism 6
vvi01200 Carbon metabolism 5
vvi00780 Biotin metabolism 5
vvi01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00620 Pyruvate metabolism 7
vvi01200 Carbon metabolism 7
vvi01210 2-Oxocarboxylic acid metabolism 7
vvi00010 Glycolysis / Gluconeogenesis 6
vvi00020 Citrate cycle (TCA cycle) 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 13
ath00620 Pyruvate metabolism 12
ath00010 Glycolysis / Gluconeogenesis 9
ath00785 Lipoic acid metabolism 8
ath00020 Citrate cycle (TCA cycle) 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00620 Pyruvate metabolism 10
ath01200 Carbon metabolism 9
ath00061 Fatty acid biosynthesis 8
ath01212 Fatty acid metabolism 7
ath00010 Glycolysis / Gluconeogenesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00620 Pyruvate metabolism 10
gma01200 Carbon metabolism 10
gma00010 Glycolysis / Gluconeogenesis 9
gma00020 Citrate cycle (TCA cycle) 8
gma00785 Lipoic acid metabolism 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00620 Pyruvate metabolism 12
gma01200 Carbon metabolism 12
gma00010 Glycolysis / Gluconeogenesis 9
gma00020 Citrate cycle (TCA cycle) 9
gma00785 Lipoic acid metabolism 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00620 Pyruvate metabolism 8
bra01200 Carbon metabolism 8
bra00020 Citrate cycle (TCA cycle) 6
bra00010 Glycolysis / Gluconeogenesis 6
bra00785 Lipoic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00620 Pyruvate metabolism 8
bra01200 Carbon metabolism 8
bra00061 Fatty acid biosynthesis 6
bra00020 Citrate cycle (TCA cycle) 6
bra00010 Glycolysis / Gluconeogenesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 9
ppo00620 Pyruvate metabolism 8
ppo01240 Biosynthesis of cofactors 6
ppo00061 Fatty acid biosynthesis 6
ppo00010 Glycolysis / Gluconeogenesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00061 Fatty acid biosynthesis 7
ppo01212 Fatty acid metabolism 6
ppo00620 Pyruvate metabolism 5
ppo01200 Carbon metabolism 5
ppo01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00061 Fatty acid biosynthesis 11
mtr01212 Fatty acid metabolism 11
mtr00620 Pyruvate metabolism 11
mtr01200 Carbon metabolism 11
mtr00010 Glycolysis / Gluconeogenesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00061 Fatty acid biosynthesis 10
mtr01212 Fatty acid metabolism 10
mtr00620 Pyruvate metabolism 10
mtr01200 Carbon metabolism 10
mtr01240 Biosynthesis of cofactors 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 15
ghi01200 Carbon metabolism 15
ghi00010 Glycolysis / Gluconeogenesis 13
ghi00020 Citrate cycle (TCA cycle) 13
ghi00785 Lipoic acid metabolism 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 12
ghi01200 Carbon metabolism 12
ghi00010 Glycolysis / Gluconeogenesis 10
ghi00020 Citrate cycle (TCA cycle) 10
ghi00785 Lipoic acid metabolism 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 5
bna01212 Fatty acid metabolism 5
bna00010 Glycolysis / Gluconeogenesis 4
bna00020 Citrate cycle (TCA cycle) 4
bna00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 5
bna01212 Fatty acid metabolism 5
bna00010 Glycolysis / Gluconeogenesis 4
bna00020 Citrate cycle (TCA cycle) 4
bna00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 11
cit00620 Pyruvate metabolism 9
cit00010 Glycolysis / Gluconeogenesis 8
cit00020 Citrate cycle (TCA cycle) 5
cit00785 Lipoic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00620 Pyruvate metabolism 11
sly01200 Carbon metabolism 11
sly00061 Fatty acid biosynthesis 10
sly01212 Fatty acid metabolism 9
sly00785 Lipoic acid metabolism 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 10
sly00620 Pyruvate metabolism 9
sly00010 Glycolysis / Gluconeogenesis 8
sly00785 Lipoic acid metabolism 8
sly00020 Citrate cycle (TCA cycle) 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00010 Glycolysis / Gluconeogenesis 6
sot00020 Citrate cycle (TCA cycle) 6
sot00620 Pyruvate metabolism 6
sot00785 Lipoic acid metabolism 6
sot01200 Carbon metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00020 Citrate cycle (TCA cycle) 7
sot01200 Carbon metabolism 7
sot01210 2-Oxocarboxylic acid metabolism 7
sot00010 Glycolysis / Gluconeogenesis 6
sot00620 Pyruvate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 11
nta00620 Pyruvate metabolism 9
nta00010 Glycolysis / Gluconeogenesis 8
nta00020 Citrate cycle (TCA cycle) 8
nta00785 Lipoic acid metabolism 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00620 Pyruvate metabolism 10
nta01200 Carbon metabolism 10
nta00010 Glycolysis / Gluconeogenesis 8
nta00020 Citrate cycle (TCA cycle) 8
nta00785 Lipoic acid metabolism 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00620 Pyruvate metabolism 9
osa01200 Carbon metabolism 9
osa00010 Glycolysis / Gluconeogenesis 8
osa01210 2-Oxocarboxylic acid metabolism 8
osa00020 Citrate cycle (TCA cycle) 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01210 2-Oxocarboxylic acid metabolism 8
osa00620 Pyruvate metabolism 8
osa00785 Lipoic acid metabolism 8
osa00061 Fatty acid biosynthesis 7
osa01240 Biosynthesis of cofactors 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00620 Pyruvate metabolism 11
zma01200 Carbon metabolism 9
zma00010 Glycolysis / Gluconeogenesis 8
zma00020 Citrate cycle (TCA cycle) 7
zma00061 Fatty acid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00620 Pyruvate metabolism 10
zma01200 Carbon metabolism 10
zma00010 Glycolysis / Gluconeogenesis 9
zma00061 Fatty acid biosynthesis 9
zma00020 Citrate cycle (TCA cycle) 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 14
tae00620 Pyruvate metabolism 13
tae00010 Glycolysis / Gluconeogenesis 12
tae00785 Lipoic acid metabolism 9
tae00020 Citrate cycle (TCA cycle) 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 4
tae00620 Pyruvate metabolism 4
tae01200 Carbon metabolism 4
tae00020 Citrate cycle (TCA cycle) 3
tae00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00010 Glycolysis / Gluconeogenesis 4
hvu00020 Citrate cycle (TCA cycle) 4
hvu00620 Pyruvate metabolism 4
hvu00785 Lipoic acid metabolism 4
hvu01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 9
sbi00010 Glycolysis / Gluconeogenesis 6
sbi00020 Citrate cycle (TCA cycle) 6
sbi00620 Pyruvate metabolism 6
sbi00785 Lipoic acid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 6
sbi00190 Oxidative phosphorylation 6
sbi00010 Glycolysis / Gluconeogenesis 4
sbi00020 Citrate cycle (TCA cycle) 4
sbi00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00620 Pyruvate metabolism 8
bdi00061 Fatty acid biosynthesis 7
bdi01200 Carbon metabolism 7
bdi01212 Fatty acid metabolism 6
bdi00010 Glycolysis / Gluconeogenesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 4
bdi00920 Sulfur metabolism 3
bdi00970 Aminoacyl-tRNA biosynthesis 3
bdi01200 Carbon metabolism 2
bdi00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00620 Pyruvate metabolism 10
cre01200 Carbon metabolism 10
cre00061 Fatty acid biosynthesis 10
cre01212 Fatty acid metabolism 10
cre00010 Glycolysis / Gluconeogenesis 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100259931 100250049 818024 839891 100780826 100787512 103835237 103840432 7482443 7472564 120577439 11411402 107905888 107913605 106361600 106375942 102610434 101252977 101268205 102588815 102604284 107763479 107818291 4352803 4333564 100282233 100284103 123122721 123110244 123395946 123452111 8062209 8084420 100827441 100835788 5718717
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