ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100263010	small ribosomal subunit protein uS19
vvi-r.5	100263010	small ribosomal subunit protein uS19
vvi-m.5	100263010	small ribosomal subunit protein uS19
vvi-u.5	100256302	small ribosomal subunit protein uS19
ath-u.5	AT5G09500	Ribosomal protein S19 family protein
ath-u.5	AT5G09510	Ribosomal protein S19 family protein
gma-u.5	100777379	40S ribosomal protein S15-4
gma-u.5	100499781	uncharacterized LOC100499781
gma-u.5	100499657	40S ribosomal protein S15
ppo-u.5	7498033	40S ribosomal protein S15-4
ppo-u.5	7454330	40S ribosomal protein S15-4
ppo-u.5	7471994	40S ribosomal protein S15
mtr-u.5	11411156	40S ribosomal protein S15-4
mtr-u.5	11439204	40S ribosomal protein S15-4
mtr-u.5	25484337	40S ribosomal protein S15-4
sly-u.5	101244902	small ribosomal subunit protein uS19
sly-u.5	101249784	small ribosomal subunit protein uS19
sly-u.5	101254699	small ribosomal subunit protein uS19
osa-u.5	4334438	small ribosomal subunit protein uS19-like
osa-u.5	4342580	40S ribosomal protein S15-like
zma-u.5	100281004	40S ribosomal protein S15
zma-u.5	103648250	40S ribosomal protein S15
zma-u.5	100282387	40S ribosomal protein S15

Annotation

functional annotation

KEGG

vvi03010 [list] [network] Ribosome (544 genes)

GO BP

GO:0000028 [list] [network] ribosomal small subunit assembly	(20 genes)	IEA
GO:0006412 [list] [network] translation	(410 genes)	IEA

GO CC

GO:0022627 [list] [network] cytosolic small ribosomal subunit	(59 genes)	IEA
GO:0005840 [list] [network] ribosome	(293 genes)	IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome	(288 genes)	IEA
GO:0003723 [list] [network] RNA binding	(1286 genes)	IEA

Protein

XP_002282294.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 9, nucl 1

(predict for XP_002282294.1)

Subcellular
localization
TargetP

other 9

(predict for XP_002282294.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100263010	vvi-r.5 for 100263010	vvi-m.5 for 100263010	vvi-u.5 for 100256302	ath-u.5 for AT5G09500	ath-u.5 for AT5G09510	gma-u.5 for 100777379	gma-u.5 for 100499781	gma-u.5 for 100499657	ppo-u.5 for 7498033	ppo-u.5 for 7454330	ppo-u.5 for 7471994	mtr-u.5 for 11411156	mtr-u.5 for 11439204	mtr-u.5 for 25484337	sly-u.5 for 101244902	sly-u.5 for 101249784	sly-u.5 for 101254699	osa-u.5 for 4334438	osa-u.5 for 4342580	zma-u.5 for 100281004	zma-u.5 for 103648250	zma-u.5 for 100282387

Ortholog

Ortholog ID: 1436

Species

vvi

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

small ribosomal subunit protein uS19

uncharacterized LOC100499781

40S ribosomal protein S15-4

40S ribosomal protein S15-1

40S ribosomal protein S15-4

40S ribosomal protein S15

40S ribosomal protein S15-4

40S ribosomal protein S15-1

40S ribosomal protein S15-4

small ribosomal subunit protein uS19

40S ribosomal protein S15-like

small ribosomal subunit protein uS19

40S ribosomal protein S15-like

small ribosomal subunit protein uS19-like

40S ribosomal protein S15

40S ribosomal protein S15-4

40S ribosomal protein S15

40S ribosomal protein S15-like

40S ribosomal protein S15

ribosomal protein S15

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	21
gma04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00940	Phenylpropanoid biosynthesis	3
bra00941	Flavonoid biosynthesis	2
bra00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	13
ghi00230	Purine metabolism	2
ghi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	4
nta03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	18
nta00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	20
zma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	14
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	17

Expression

Expression pattern

Entrez Gene ID^*

100256302

100263010

100499781

100801408

103843661

103850375

7498033

7471994

25484337

11439204

107955458

107928592

106384933

111205445

102617909

102626701

101254699

101244902

102590786

102590282

107800576

107785533

4342580

4334438

100282387

100216869

123044867

123123231

123452740

123426180

8060758

8081246

100836895

5721581

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100263010 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100263010 (vvi-u.5 coexpression data)


Species	vvi	ath	gma	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	2	3	3	3	3	2	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100263010 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100263010 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**