ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
vvi-u.5	100263145	histidine kinase 2
vvi-r.5	100263145	histidine kinase 2
vvi-u.5	100247122	histidine kinase 3
vvi-u.5	100254304	histidine kinase 4
ath-u.5	WOL	CHASE domain containing histidine kinase protein
ath-u.5	HK3	histidine kinase 3
ath-u.5	HK2	histidine kinase 2
gma-u.5	100813204	histidine kinase 4
gma-u.5	100781655	histidine kinase 2
gma-u.5	100805107	histidine kinase 2
ppo-u.5	7455991	histidine kinase 2
ppo-u.5	7496567	histidine kinase 3
ppo-u.5	7457818	histidine kinase 4
mtr-u.5	11423040	histidine kinase 2
mtr-u.5	11427019	histidine kinase 3
mtr-u.5	25486961	histidine kinase 4
sly-u.5	101255900	histidine kinase 2
sly-u.5	101247719	histidine kinase 3
sly-u.5	101262506	histidine kinase 4
osa-u.5	107275680	probable histidine kinase 6
osa-u.5	4348447	probable histidine kinase 5
osa-u.5	9271913	probable histidine kinase 3
zma-u.5	541634	histidine kinase 1
zma-u.5	541641	histidine kinase 2
zma-u.5	541642	histidine kinase 3

Top 50 coexpressed genes to 100263145 (vvi-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100263145 (vvi-u.5 coexpression data)

CoexMap"100263145"

[Cytoscape]

Annotation

functional annotation

KEGG

vvi04075 [list] [network] Plant hormone signal transduction (400 genes)

GO BP

GO:0000160 [list] [network] phosphorelay signal transduction system	(116 genes)	IEA
GO:0016310 [list] [network] phosphorylation	(1286 genes)	IEA

GO CC

GO MF

GO:0000155 [list] [network] phosphorelay sensor kinase activity

(14 genes)

IEA

Protein

XP_002269977.2 [sequence] [blastp]
XP_010657450.1 [sequence] [blastp]
XP_010657451.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, nucl 3, plas 1, vacu 1, E.R. 1, E.R._vacu 1, E.R._plas 1	(predict for XP_002269977.2)
chlo 5, nucl 3, plas 1, vacu 1, E.R. 1, E.R._vacu 1, E.R._plas 1	(predict for XP_010657450.1)
chlo 5, nucl 3, plas 1, vacu 1, E.R. 1, E.R._vacu 1, E.R._plas 1	(predict for XP_010657451.1)

Subcellular
localization
TargetP

mito 4, scret 3	(predict for XP_002269977.2)
mito 4, scret 3	(predict for XP_010657450.1)
mito 4, scret 3	(predict for XP_010657451.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100263145	vvi-r.5 for 100263145	vvi-u.5 for 100247122	vvi-u.5 for 100254304	ath-u.5 for WOL	ath-u.5 for HK3	ath-u.5 for HK2	gma-u.5 for 100813204	gma-u.5 for 100781655	gma-u.5 for 100805107	ppo-u.5 for 7455991	ppo-u.5 for 7496567	ppo-u.5 for 7457818	mtr-u.5 for 11423040	mtr-u.5 for 11427019	mtr-u.5 for 25486961	sly-u.5 for 101255900	sly-u.5 for 101247719	sly-u.5 for 101262506	osa-u.5 for 107275680	osa-u.5 for 4348447	osa-u.5 for 9271913	zma-u.5 for 541634	zma-u.5 for 541641	zma-u.5 for 541642

Ortholog

Ortholog ID: 941

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

LOC100247122

LOC100254304

HK2

WOL

Function^*

histidine kinase 3

histidine kinase 4

histidine kinase 2

CHASE domain containing histidine kinase protein

histidine kinase 3

histidine kinase 4

histidine kinase 3

histidine kinase 4

histidine kinase 3

histidine kinase 2

histidine kinase 4

histidine kinase 3

histidine kinase 2

histidine kinase 3-like

histidine kinase 3

histidine kinase 2

histidine kinase 4

histidine kinase 2

histidine kinase 3

histidine kinase 2-like

probable histidine kinase 5

probable histidine kinase 4

histidine kinase

histidine kinase4

probable histidine kinase 3

probable histidine kinase 6

probable histidine kinase 3

probable histidine kinase 4

probable histidine kinase 3

probable histidine kinase 4

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	7
vvi00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	9
ath00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	3
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	3
mtr04120	Ubiquitin mediated proteolysis	2
mtr00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	2
bna04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04626	Plant-pathogen interaction	2
bna04136	Autophagy - other	2
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	4
cit04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00500	Starch and sucrose metabolism	3
sot00564	Glycerophospholipid metabolism	2
sot00565	Ether lipid metabolism	2
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	4
nta04814	Motor proteins	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	7
osa00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01230	Biosynthesis of amino acids	3
zma00250	Alanine, aspartate and glutamate metabolism	2
zma00910	Nitrogen metabolism	2
zma04075	Plant hormone signal transduction	2
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	6
zma00500	Starch and sucrose metabolism	3
zma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	5
tae00230	Purine metabolism	3
tae00232	Caffeine metabolism	2
tae01232	Nucleotide metabolism	2
tae04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	4
hvu04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01240	Biosynthesis of cofactors	3
bdi04981	Folate transport and metabolism	2
bdi00630	Glyoxylate and dicarboxylate metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100247122

100254304

833552

814714

100801546

100818481

103829073

103827548

7457818

7496567

25501759

11423040

107918097

107946265

106390821

106358089

102615053

102612025

101262506

101255900

102591086

102587294

107821378

107779667

4348447

4333916

732761

732762

123072042

123145547

123445255

123447523

8060004

110433965

100824891

100834755

5719140

66054877

The preparation time of this page was 0.1 [sec].


Species	vvi	ath	gma	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	3	3	3	3	3	3	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100263145 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100263145 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**