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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100263826   large ribosomal subunit protein bL19c 
 vvi-r.5   100263826   large ribosomal subunit protein bL19c 
 vvi-m.5   100263826   large ribosomal subunit protein bL19c 
 vvi-u.5   100255272   uncharacterized LOC100255272 
 ath-u.5   AT4G11630   Ribosomal protein L19 family protein 
 ath-u.5   AT4G17560   Ribosomal protein L19 family protein 
 ath-u.5   AT5G11750   Ribosomal protein L19 family protein 
 gma-u.5   100305649   uncharacterized LOC100305649 
 gma-u.5   100500328   uncharacterized LOC100500328 
 gma-u.5   100778384   50S ribosomal protein L19-1, chloroplastic 
 bra-r.6   103839541   50S ribosomal protein L19-2, chloroplastic 
 bra-r.6   103846696   50S ribosomal protein L19, chloroplastic 
 bra-r.6   103834022   50S ribosomal protein L19-1, chloroplastic 
 ppo-u.5   18094567   50S ribosomal protein L19, chloroplastic 
 ppo-u.5   7458060   50S ribosomal protein L19-1, chloroplastic 
 mtr-u.5   25489120   50S ribosomal protein L19, chloroplastic 
 mtr-u.5   11435628   50S ribosomal protein L19, chloroplastic 
 ghi-r.1   107940974   50S ribosomal protein L19-1, chloroplastic 
 ghi-r.1   107953367   50S ribosomal protein L19-1, chloroplastic 
 bna-r.1   106430910   50S ribosomal protein L19-1, chloroplastic-like 
 bna-r.1   106429804   50S ribosomal protein L19-1, chloroplastic-like 
 bna-r.1   106383637   50S ribosomal protein L19-1, chloroplastic-like 
 cit-r.1   102606956   50S ribosomal protein L19-1, chloroplastic 
 cit-r.1   102626194   50S ribosomal protein L19-1, chloroplastic-like 
 sly-u.5   101245574   large ribosomal subunit protein bL19cy 
 sly-u.5   100037517   L19 ribosomal protein-like 
 sot-r.1   102581085   50S ribosomal protein L19-1, chloroplastic-like 
 sot-r.1   102594934   50S ribosomal protein L19-2, chloroplastic-like 
 nta-r.1   107787791   large ribosomal subunit protein bL19c 
 nta-r.1   107800535   large ribosomal subunit protein bL19c 
 nta-r.1   107802091   uncharacterized LOC107802091 
 osa-u.5   9272428   large ribosomal subunit protein bL19cy 
 osa-u.5   4328671   large ribosomal subunit protein bL19c 
 zma-u.5   100381882   50S ribosomal protein L19, chloroplastic-like 
 zma-u.5   100274270   50S ribosomal protein L19, chloroplastic-like 
 tae-r.2   123086649   50S ribosomal protein L19, chloroplastic 
 tae-r.2   123094577   50S ribosomal protein L19, chloroplastic 
 tae-r.2   123096300   50S ribosomal protein L19, chloroplastic 
 hvu-r.1   123403248   50S ribosomal protein L19-2, chloroplastic-like 
 hvu-r.1   123407435   50S ribosomal protein L19, chloroplastic-like 
 hvu-r.1   123447920   50S ribosomal protein L19, chloroplastic-like 
 sbi-r.1   8073975   50S ribosomal protein L19-1, chloroplastic 
 sbi-r.1   8066075   50S ribosomal protein L19-2, chloroplastic 
 bdi-r.1   100846382   50S ribosomal protein L19, chloroplastic 
 bdi-r.1   100842552   50S ribosomal protein L19-2, chloroplastic 
 bdi-r.1   100837194   50S ribosomal protein L19, chloroplastic 
 cre-r.1   CHLRE_17g734450v5   uncharacterized protein 

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Top 50 coexpressed genes to 100263826 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100263826 (vvi-u.5 coexpression data)

CoexMap"100263826"


vviLOC100263826 | Entrez gene ID : 100263826      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 2 2 2 3 2 2 2 3 2 2 3 3 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi03010 [list] [network] Ribosome (544 genes)
GO BP
GO:0006412 [list] [network] translation  (410 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (293 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (288 genes)  IEA  
Protein XP_002264869.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_002264869.3)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002264869.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100263826
vvi-r.5
for
100263826
vvi-m.5
for
100263826
vvi-u.5
for
100255272
ath-u.5
for
AT4G11630
ath-u.5
for
AT4G17560
ath-u.5
for
AT5G11750
gma-u.5
for
100305649
gma-u.5
for
100500328
gma-u.5
for
100778384
bra-r.6
for
103839541
bra-r.6
for
103846696
bra-r.6
for
103834022
ppo-u.5
for
18094567
ppo-u.5
for
7458060
mtr-u.5
for
25489120
mtr-u.5
for
11435628
ghi-r.1
for
107940974
ghi-r.1
for
107953367
bna-r.1
for
106430910
bna-r.1
for
106429804
bna-r.1
for
106383637
cit-r.1
for
102606956
cit-r.1
for
102626194
sly-u.5
for
101245574
sly-u.5
for
100037517
sot-r.1
for
102581085
sot-r.1
for
102594934
nta-r.1
for
107787791
nta-r.1
for
107800535
nta-r.1
for
107802091
osa-u.5
for
9272428
osa-u.5
for
4328671
zma-u.5
for
100381882
zma-u.5
for
100274270
tae-r.2
for
123086649
tae-r.2
for
123094577
tae-r.2
for
123096300
hvu-r.1
for
123403248
hvu-r.1
for
123407435
hvu-r.1
for
123447920
sbi-r.1
for
8073975
sbi-r.1
for
8066075
bdi-r.1
for
100846382
bdi-r.1
for
100842552
bdi-r.1
for
100837194
cre-r.1
for
CHLRE_17g734450v5


Ortholog ID: 1870
Species vvi vvi ath ath ath gma gma gma bra bra bra ppo ppo mtr mtr ghi bna bna bna cit cit sly sly sot sot nta nta nta osa osa zma zma tae tae tae hvu hvu hvu sbi sbi bdi bdi bdi cre
Symbol LOC100263826 LOC100255272 AT4G17560 AT5G11750 AT1G24240 LOC100500328 LOC100778384 LOC100817304 LOC103839541 LOC103846696 LOC103850792 LOC18094567 LOC7458060 LOC25489120 LOC11435628 LOC107926588 LOC106383637 LOC111211029 LOC106418702 LOC102606956 LOC102626194 LOC101245574 LOC100037517 LOC102581085 LOC102594934 LOC107787791 LOC107800535 LOC107830578 LOC9272428 LOC4328671 LOC100381882 LOC100274270 LOC123086649 LOC123094577 LOC123144975 LOC123403248 LOC123407435 LOC123447920 LOC8073975 LOC8066075 LOC100846382 LOC100842552 LOC100837194 CHLRE_17g734450v5
Function* large ribosomal subunit protein bL19c uncharacterized LOC100255272 Ribosomal protein L19 family protein Ribosomal protein L19 family protein Ribosomal protein L19 family protein uncharacterized LOC100500328 50S ribosomal protein L19-1, chloroplastic 50S ribosomal protein L19-1, chloroplastic 50S ribosomal protein L19-2, chloroplastic 50S ribosomal protein L19, chloroplastic 50S ribosomal protein L19-1, chloroplastic 50S ribosomal protein L19, chloroplastic 50S ribosomal protein L19-1, chloroplastic 50S ribosomal protein L19, chloroplastic 50S ribosomal protein L19, chloroplastic 50S ribosomal protein L19-1, chloroplastic 50S ribosomal protein L19-1, chloroplastic-like 50S ribosomal protein L19-1, chloroplastic-like 50S ribosomal protein L19-2, chloroplastic 50S ribosomal protein L19-1, chloroplastic 50S ribosomal protein L19-1, chloroplastic-like large ribosomal subunit protein bL19cy L19 ribosomal protein-like 50S ribosomal protein L19-1, chloroplastic-like 50S ribosomal protein L19-2, chloroplastic-like large ribosomal subunit protein bL19c large ribosomal subunit protein bL19c uncharacterized LOC107830578 large ribosomal subunit protein bL19cy large ribosomal subunit protein bL19c 50S ribosomal protein L19, chloroplastic-like 50S ribosomal protein L19, chloroplastic-like 50S ribosomal protein L19, chloroplastic 50S ribosomal protein L19, chloroplastic 50S ribosomal protein L19, chloroplastic 50S ribosomal protein L19-2, chloroplastic-like 50S ribosomal protein L19, chloroplastic-like 50S ribosomal protein L19, chloroplastic-like 50S ribosomal protein L19-1, chloroplastic 50S ribosomal protein L19-2, chloroplastic 50S ribosomal protein L19, chloroplastic 50S ribosomal protein L19-2, chloroplastic 50S ribosomal protein L19, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 5
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00900 Terpenoid backbone biosynthesis 3
ath00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma03040 Spliceosome 2
gma03018 RNA degradation 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
ghi04626 Plant-pathogen interaction 2
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 15
nta00860 Porphyrin metabolism 2
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
nta00860 Porphyrin metabolism 2
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu00510 N-Glycan biosynthesis 2
hvu00513 Various types of N-glycan biosynthesis 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 13
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 12
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 14
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100263826 100255272 827471 831047 839038 100500328 100778384 100817304 103839541 103846696 103850792 18094567 7458060 25489120 11435628 107926588 106383637 111211029 106418702 102606956 102626194 101245574 100037517 102581085 102594934 107787791 107800535 107830578 9272428 4328671 100381882 100274270 123086649 123094577 123144975 123403248 123407435 123447920 8073975 8066075 100846382 100842552 100837194 5718620
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