ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100264575	uncharacterized LOC100264575
vvi-r.5	100264575	uncharacterized LOC100264575
vvi-m.5	100264575	uncharacterized LOC100264575
ath-u.5	AT4G32620	Enhancer of polycomb-like transcription factor protein
gma-u.5	100792436	uncharacterized LOC100792436
gma-u.5	100789801	uncharacterized LOC100789801
gma-u.5	100781230	uncharacterized LOC100781230
ppo-u.5	7495738	uncharacterized LOC7495738
ppo-u.5	7462958	uncharacterized LOC7462958
mtr-u.5	25481914	uncharacterized LOC25481914
sly-u.5	101258290	uncharacterized LOC101258290
osa-u.5	4323879	uncharacterized LOC4323879
zma-u.5	103634880	Enhancer of polycomb-like transcription factor protein
zma-u.5	100383188	uncharacterized LOC100383188

Annotation

functional annotation

KEGG

GO BP

GO:0006357 [list] [network] regulation of transcription by RNA polymerase II

(343 genes)

IEA

GO CC

GO:0032777 [list] [network] piccolo histone acetyltransferase complex

(3 genes)

IEA

GO MF

Protein

XP_010648566.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for XP_010648566.1)

Subcellular
localization
TargetP

other 7, chlo 4

(predict for XP_010648566.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100264575	vvi-r.5 for 100264575	vvi-m.5 for 100264575	ath-u.5 for AT4G32620	gma-u.5 for 100792436	gma-u.5 for 100789801	gma-u.5 for 100781230	ppo-u.5 for 7495738	ppo-u.5 for 7462958	mtr-u.5 for 25481914	sly-u.5 for 101258290	osa-u.5 for 4323879	zma-u.5 for 103634880	zma-u.5 for 100383188

Ortholog

Ortholog ID: 7305

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC100264575

Enhancer of polycomb-like transcription factor protein

uncharacterized LOC100789801

uncharacterized LOC100792436

uncharacterized LOC103850704

uncharacterized LOC7462958

uncharacterized LOC7495738

uncharacterized LOC25481914

uncharacterized LOC107953671

uncharacterized LOC121225247

uncharacterized LOC106410569

uncharacterized LOC106375339

uncharacterized LOC102626885

uncharacterized LOC101258290

uncharacterized LOC102595136

uncharacterized LOC107763011

uncharacterized LOC107780933

uncharacterized LOC4323879

Enhancer of polycomb-like transcription factor protein

uncharacterized LOC123069000

uncharacterized LOC123077530

uncharacterized LOC123442978

uncharacterized LOC8078775

uncharacterized LOC100825089

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03082	ATP-dependent chromatin remodeling	3
ath03013	Nucleocytoplasmic transport	2
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	2
bra00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00310	Lysine degradation	5
bna03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00310	Lysine degradation	5
bna03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	3
cit03082	ATP-dependent chromatin remodeling	2
cit00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00310	Lysine degradation	3
sbi04120	Ubiquitin mediated proteolysis	2

Expression

Expression pattern

Entrez Gene ID^*

100264575

829397

100789801

100792436

103850704

7462958

7495738

25481914

107953671

121225247

106410569

106375339

102626885

101258290

102595136

107763011

107780933

4323879

103634880

123069000

123077530

123442978

8078775

100825089

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100264575 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100264575 (vvi-u.5 coexpression data)


Species	vvi	ath	gma	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	1	3	2	1	1	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100264575 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100264575 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**