Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5  100265139  putative F-box protein At3g44060 
 vvi-r.5  100265139  putative F-box protein At3g44060 
 vvi-m.5  100265139  putative F-box protein At3g44060 
 vvi-u.5  104880213  putative F-box/LRR-repeat protein At5g02700 
 gma-u.5  100794867  jacalin-related lectin 19 
 mtr-u.5  11423279  putative FBD-associated F-box protein At5g56560 
 mtr-u.5  11433440  putative F-box/LRR-repeat protein At3g18150 
 sly-u.5  101248859  F-box/LRR-repeat protein At3g03360 
 sot-r.1  102598789  putative F-box/LRR-repeat protein At5g02700 
 nta-r.1  107763143  uncharacterized LOC107763143 
 nta-r.1  107824979  uncharacterized LOC107824979 

close


Top 50 coexpressed genes to 100265139 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100265139 (vvi-u.5 coexpression data)

CoexMap"100265139"


vviLOC100265139 | Entrez gene ID : 100265139
Species vvi gma mtr sly sot nta hvu bdi osa tae bna ppo zma cre sbi ath bra ghi cit
Paralog 4 1 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_059595427.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 1,  cysk 1,  cysk_nucl 1,  chlo 1,  plas 1,  extr 1,  pero 1,  golg 1,  golg_plas 1  (predict for XP_059595427.1)
Subcellular
localization
TargetP
other 7  (predict for XP_059595427.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

vvi-u.5
for
100265139


vvi-r.5
for
100265139


vvi-m.5
for
100265139


vvi-u.5
for
104880213


gma-u.5
for
100794867


mtr-u.5
for
11423279


mtr-u.5
for
11433440


sly-u.5
for
101248859


sot-r.1
for
102598789


nta-r.1
for
107763143


nta-r.1
for
107824979



Ortholog ID: 13642
Species vvi gma mtr mtr sly sot nta
Symbol LOC104880213 LOC100794867 LOC11423279 LOC11433440 LOC101248859 LOC102598789 LOC107824979
Function* putative F-box/LRR-repeat protein At5g02700 jacalin-related lectin 19 putative FBD-associated F-box protein At5g56560 putative F-box/LRR-repeat protein At3g18150 F-box/LRR-repeat protein At3g03360 putative F-box/LRR-repeat protein At5g02700 uncharacterized LOC107824979
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00600 Sphingolipid metabolism 2
sot04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 104880213 100794867 11423279 11433440 101248859 102598789 107824979
The preparation time of this page was 0.1 [sec].