ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100267416	uncharacterized LOC100267416
vvi-r.5	100267416	uncharacterized LOC100267416
ath-u.5	AT1G53460	craniofacial development protein
gma-u.5	100796418	uncharacterized LOC100796418
ppo-u.5	7459109	uncharacterized LOC7459109
mtr-u.5	11409278	uncharacterized LOC11409278
mtr-u.5	11406206	uncharacterized LOC11406206
sly-u.5	101258699	uncharacterized LOC101258699
sly-u.5	101258412	uncharacterized LOC101258412
sly-u.5	101247991	uncharacterized LOC101247991
osa-u.5	4327077	uncharacterized LOC4327077
zma-u.5	100273035	uncharacterized LOC100273035

functional annotation

KEGG

GO BP

GO CC

GO:0005737 [list] [network] cytoplasm

(4496 genes)

IEA

GO MF

GO:0003729 [list] [network] mRNA binding

(233 genes)

IEA

Protein

XP_002283379.1 [sequence] [blastp]
XP_010644100.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, mito 3, chlo 2	(predict for XP_002283379.1)
nucl 5, mito 3, chlo 2	(predict for XP_010644100.1)

Subcellular
localization
TargetP

mito 6	(predict for XP_002283379.1)
mito 6	(predict for XP_010644100.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100267416	vvi-r.5 for 100267416	ath-u.5 for AT1G53460	gma-u.5 for 100796418	ppo-u.5 for 7459109	mtr-u.5 for 11409278	mtr-u.5 for 11406206	sly-u.5 for 101258699	sly-u.5 for 101258412	sly-u.5 for 101247991	osa-u.5 for 4327077	zma-u.5 for 100273035

Ortholog ID: 8742

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC100267416

craniofacial development protein

uncharacterized LOC100796418

uncharacterized LOC103832667

uncharacterized LOC7459109

uncharacterized LOC11406206

uncharacterized LOC11409278

uncharacterized LOC107895316

uncharacterized LOC107935622

uncharacterized BNAC03G69640D

uncharacterized LOC125583532

uncharacterized LOC102628241

uncharacterized LOC101258412

uncharacterized LOC101258699

uncharacterized LOC102580802

uncharacterized LOC102580559

uncharacterized LOC107821009

uncharacterized LOC4327077

uncharacterized LOC100273035

uncharacterized LOC123439598

uncharacterized LOC8080504

uncharacterized LOC100844661

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	4
gma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	4
ghi00230	Purine metabolism	2
ghi00250	Alanine, aspartate and glutamate metabolism	2
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03022	Basal transcription factors	6
ghi00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4
bna00230	Purine metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	4
bna03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	3
osa04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03420	Nucleotide excision repair	2
zma03040	Spliceosome	2
zma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	2
bdi03020	RNA polymerase	2

Expression

Expression pattern

Entrez Gene ID^*

100267416

841781

100796418

103832667

7459109

11406206

11409278

107895316

107935622

106377304

125583532

102628241

101258412

101258699

102580802

102580559

107821009

4327077

100273035

123439598

8080504

100844661

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100267416 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100267416 (vvi-u.5 coexpression data)


Species	vvi	ath	gma	ppo	mtr	sly	osa	zma	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	2	1	1	1	2	3	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100267416 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100267416 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**