ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	RHS12	root hair specific 12
ath-u.5	AT5G04960	Plant invertase/pectin methylesterase inhibitor superfamily
mtr-u.5	25501130	putative pectinesterase/pectinesterase inhibitor 24
mtr-u.5	11419442	putative pectinesterase/pectinesterase inhibitor 24
sly-u.5	101260091	probable pectinesterase/pectinesterase inhibitor 46
sly-u.5	101248642	probable pectinesterase/pectinesterase inhibitor 46

functional annotation

KEGG

GO BP

GO:0042545 [list] [network] cell wall modification

(60 genes)

IEA

GO CC

GO MF

GO:0046910 [list] [network] pectinesterase inhibitor activity	(48 genes)	IEA
GO:0030599 [list] [network] pectinesterase activity	(60 genes)	IEA

Protein

XP_002273396.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, nucl 3, vacu 1, E.R. 1, cysk_nucl 1, nucl_plas 1, E.R._vacu 1

(predict for XP_002273396.2)

Subcellular
localization
TargetP

other 4

(predict for XP_002273396.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for RHS12	ath-u.5 for AT5G04960	mtr-u.5 for 25501130	mtr-u.5 for 11419442	sly-u.5 for 101260091	sly-u.5 for 101248642

Ortholog ID: 6548

Species

ath

bra

mtr

bna

sly

nta

Symbol

RHS12

Function^*

root hair specific 12

Plant invertase/pectin methylesterase inhibitor superfamily

probable pectinesterase/pectinesterase inhibitor 46

putative pectinesterase/pectinesterase inhibitor 24

probable pectinesterase/pectinesterase inhibitor 46

putative pectinesterase/pectinesterase inhibitor 46

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00940	Phenylpropanoid biosynthesis	2
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00940	Phenylpropanoid biosynthesis	4
mtr00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00940	Phenylpropanoid biosynthesis	3
mtr00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00480	Glutathione metabolism	3
bna00020	Citrate cycle (TCA cycle)	2
bna01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00940	Phenylpropanoid biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	5
sly03010	Ribosome	3

Expression

Expression pattern

Entrez Gene ID^*

820240

830378

108871269

103859360

11419442

25501130

106434577

106356765

101260091

101248642

107810365


Species	ath	mtr	sly	hvu	zma	ghi	gma	bna	sbi	vvi	cit	bra	osa	ppo	bdi	nta	tae	cre	sot
Paralog	2	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to RHS12 (ath-u.5 coexpression data)

Top 50 enrichment test to RHS12 (ath-u.5 coexpression data)

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to RHS12 (ath-u.5 coexpression data)

Top 50 enrichment test to RHS12 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**