ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
vvi-u.5	100267990	EIN3-binding F-box protein 1
vvi-r.5	100267990	EIN3-binding F-box protein 1
vvi-m.5	100267990	EIN3-binding F-box protein 1
vvi-u.5	100249270	EIN3-binding F-box protein 1
ath-u.5	EBF1	EIN3-binding F box protein 1
ath-u.5	EBF2	EIN3-binding F box protein 2
gma-u.5	GRR1	putative EIN3-binding F-box protein
gma-u.5	100819226	EIN3-binding F-box protein 1
gma-u.5	100786182	EIN3-binding F-box protein 1
ppo-u.5	7470096	EIN3-binding F-box protein 1
ppo-u.5	7465387	EIN3-binding F-box protein 1
ppo-u.5	7471592	EIN3-binding F-box protein 1
mtr-u.5	11421031	EIN3-binding F-box protein 1
mtr-u.5	11424506	EIN3-binding F-box protein 1
mtr-u.5	11444427	EIN3-binding F-box protein 1
sly-u.5	101248690	EIN3-binding F-box protein 1
sly-u.5	EBF2	EIN3-binding F-box protein 2
osa-u.5	4341476	EIN3-binding F-box protein 1
osa-u.5	4328647	EIN3-binding F-box protein 1
zma-u.5	100279655	uncharacterized LOC100279655
zma-u.5	103649710	EIN3-binding F-box protein 1
zma-u.5	100281166	uncharacterized LOC100281166

Top 50 coexpressed genes to 100267990 (vvi-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100267990 (vvi-u.5 coexpression data)

CoexMap"100267990"

[Cytoscape]

Annotation

functional annotation

KEGG

vvi04016 [list] [network] MAPK signaling pathway - plant (152 genes)

vvi04075 [list] [network] Plant hormone signal transduction (400 genes)

GO BP

GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

(57 genes)

IEA

GO CC

GO:0019005 [list] [network] SCF ubiquitin ligase complex

(51 genes)

IEA

GO MF

GO:0005515 [list] [network] protein binding

(4232 genes)

IEA

Protein

XP_002285249.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, cyto_nucl 4, cyto 1

(predict for XP_002285249.2)

Subcellular
localization
TargetP

other 9

(predict for XP_002285249.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100267990	vvi-r.5 for 100267990	vvi-m.5 for 100267990	vvi-u.5 for 100249270	ath-u.5 for EBF1	ath-u.5 for EBF2	gma-u.5 for GRR1	gma-u.5 for 100819226	gma-u.5 for 100786182	ppo-u.5 for 7470096	ppo-u.5 for 7465387	ppo-u.5 for 7471592	mtr-u.5 for 11421031	mtr-u.5 for 11424506	mtr-u.5 for 11444427	sly-u.5 for 101248690	sly-u.5 for EBF2	osa-u.5 for 4341476	osa-u.5 for 4328647	zma-u.5 for 100279655	zma-u.5 for 103649710	zma-u.5 for 100281166

Ortholog

Ortholog ID: 1487

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

LOC100249270

LOC100267990

EBF2

EBF1

Function^*

EIN3-binding F-box protein 1

EIN3-binding F box protein 2

EIN3-binding F box protein 1

EIN3-binding F-box protein 1

EIN3-binding F-box protein 2

EIN3-binding F-box protein 1

EIN3-binding F-box protein 2

EIN3-binding F-box protein 1

EIN3-binding F-box protein 1-like

EIN3-binding F-box protein 1

EIN3-binding F-box protein 1-like

EIN3-binding F-box protein 1

uncharacterized LOC100281166

uncharacterized LOC100279655

EIN3-binding F-box protein 1

translation initiation factor IF-2-like

EIN3-binding F-box protein 1-like

EIN3-binding F-box protein 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	4
vvi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	8
vvi04075	Plant hormone signal transduction	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	8
ath04075	Plant hormone signal transduction	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	8
ath04075	Plant hormone signal transduction	7
ath04141	Protein processing in endoplasmic reticulum	2
ath03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	10
gma04075	Plant hormone signal transduction	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	9
gma04075	Plant hormone signal transduction	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00053	Ascorbate and aldarate metabolism	2
bra00520	Amino sugar and nucleotide sugar metabolism	2
bra01240	Biosynthesis of cofactors	2
bra01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	9
bra04016	MAPK signaling pathway - plant	8
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	12
ppo04016	MAPK signaling pathway - plant	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	13
ppo04016	MAPK signaling pathway - plant	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	2
mtr00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
mtr01240	Biosynthesis of cofactors	2
mtr00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	7
mtr04075	Plant hormone signal transduction	6
mtr00564	Glycerophospholipid metabolism	2
mtr00565	Ether lipid metabolism	2
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	4
ghi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	4
ghi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	6
bna04075	Plant hormone signal transduction	6
bna00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	6
bna04075	Plant hormone signal transduction	6
bna00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04016	MAPK signaling pathway - plant	8
cit04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04016	MAPK signaling pathway - plant	6
cit04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	8
sly04075	Plant hormone signal transduction	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	9
sot04075	Plant hormone signal transduction	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	10
sot04075	Plant hormone signal transduction	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	11
nta04075	Plant hormone signal transduction	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	8
nta04075	Plant hormone signal transduction	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	7
osa04016	MAPK signaling pathway - plant	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	7
osa04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	7
zma04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	6
zma04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	15
tae04075	Plant hormone signal transduction	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	12
tae04075	Plant hormone signal transduction	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	2
hvu00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	6
sbi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04814	Motor proteins	3
sbi04016	MAPK signaling pathway - plant	3
sbi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04016	MAPK signaling pathway - plant	4
bdi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	3
bdi04016	MAPK signaling pathway - plant	2
bdi04142	Lysosome	2

Expression

Expression pattern

Entrez Gene ID^*

100249270

100267990

832607

817087

100812291

100786182

103864667

103874395

7474693

7470096

11421031

11444427

107933186

107907332

106391136

106410357

102607641

102621500

101248690

102604327

102598259

107788093

107780712

4328647

4341476

100281166

100279655

123155547

123148196

123409196

123401026

8065078

8071648

100838452

100826977

5724463

The preparation time of this page was 0.1 [sec].


Species	vvi	ath	gma	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	2	3	3	3	2	2	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100267990 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100267990 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**