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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100268043   large ribosomal subunit protein uL15c 
 vvi-r.5   100268043   large ribosomal subunit protein uL15c 
 vvi-m.5   100268043   large ribosomal subunit protein uL15c 
 ath-u.5   RPL15   ribosomal protein L15 
 gma-u.5   100306183   50S ribosomal protein L15, chloroplastic 
 bra-r.6   103839350   50S ribosomal protein L15, chloroplastic 
 ppo-u.5   18102568   50S ribosomal protein L15, chloroplastic 
 ppo-u.5   7488360   50S ribosomal protein L15, chloroplastic 
 mtr-u.5   25485490   50S ribosomal protein L15, chloroplastic 
 ghi-r.1   107909570   50S ribosomal protein L15, chloroplastic 
 ghi-r.1   107898822   50S ribosomal protein L15, chloroplastic 
 ghi-r.1   107886635   50S ribosomal protein L15, chloroplastic 
 bna-r.1   106418276   50S ribosomal protein L15, chloroplastic 
 bna-r.1   106381999   50S ribosomal protein L15, chloroplastic-like 
 bna-r.1   106349417   50S ribosomal protein L15, chloroplastic-like 
 cit-r.1   102618960   50S ribosomal protein L15, chloroplastic 
 sly-u.5   101255295   large ribosomal subunit protein uL15c 
 sot-r.1   102604819   50S ribosomal protein L15, chloroplastic 
 nta-r.1   107768370   large ribosomal subunit protein uL15c-like 
 nta-r.1   107782923   large ribosomal subunit protein uL15c 
 osa-u.5   4332089   large ribosomal subunit protein uL15c 
 zma-u.5   100273366   50S ribosomal protein L15, chloroplastic-like 
 tae-r.2   123098216   50S ribosomal protein L15, chloroplastic 
 tae-r.2   123092943   50S ribosomal protein L15, chloroplastic 
 tae-r.2   123085150   50S ribosomal protein L15, chloroplastic 
 hvu-r.1   123449289   50S ribosomal protein L15, chloroplastic 
 sbi-r.1   8056875   50S ribosomal protein L15, chloroplastic 
 bdi-r.1   100827203   50S ribosomal protein L15, chloroplastic 
 cre-r.1   CHLRE_14g612450v5   uncharacterized protein 

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Top 50 coexpressed genes to 100268043 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100268043 (vvi-u.5 coexpression data)

CoexMap""


vviLOC100268043 | Entrez gene ID : 100268043      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 1 2 1 3 3 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
Function large ribosomal subunit protein uL15c
KEGG vvi03010 [list] [network] Ribosome (544 genes)
GO BP
GO:0006412 [list] [network] translation  (410 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (115 genes)  IEA  
GO:0005840 [list] [network] ribosome  (293 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (288 genes)  IEA  
Protein XP_002279311.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1  (predict for XP_002279311.2)
Subcellular
localization
TargetP
chlo 7  (predict for XP_002279311.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100268043
vvi-r.5
for
100268043
vvi-m.5
for
100268043
ath-u.5
for
RPL15
gma-u.5
for
100306183
bra-r.6
for
103839350
ppo-u.5
for
18102568
ppo-u.5
for
7488360
mtr-u.5
for
25485490
ghi-r.1
for
107909570
ghi-r.1
for
107898822
ghi-r.1
for
107886635
bna-r.1
for
106418276
bna-r.1
for
106381999
bna-r.1
for
106349417
cit-r.1
for
102618960
sly-u.5
for
101255295
sot-r.1
for
102604819
nta-r.1
for
107768370
nta-r.1
for
107782923
osa-u.5
for
4332089
zma-u.5
for
100273366
tae-r.2
for
123098216
tae-r.2
for
123092943
tae-r.2
for
123085150
hvu-r.1
for
123449289
sbi-r.1
for
8056875
bdi-r.1
for
100827203
cre-r.1
for
CHLRE_14g612450v5

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Ortholog ID: 7599
Species vvi ath gma bra ppo ppo mtr ghi ghi ghi bna bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC100268043 RPL15 LOC100306183 LOC103839350 LOC18102568 LOC7488360 LOC25485490 LOC107909570 LOC107898822 LOC107886635 LOC106418276 LOC106349417 LOC106415661 LOC102618960 LOC101255295 LOC102604819 LOC107768370 LOC107782923 LOC4332089 LOC100273366 LOC123098216 LOC123092943 LOC123085150 LOC123449289 LOC8056875 LOC100827203 CHLRE_14g612450v5
Function* large ribosomal subunit protein uL15c ribosomal protein L15 50S ribosomal protein L15, chloroplastic 50S ribosomal protein L15, chloroplastic 50S ribosomal protein L15, chloroplastic 50S ribosomal protein L15, chloroplastic 50S ribosomal protein L15, chloroplastic 50S ribosomal protein L15, chloroplastic 50S ribosomal protein L15, chloroplastic 50S ribosomal protein L15, chloroplastic 50S ribosomal protein L15, chloroplastic 50S ribosomal protein L15, chloroplastic-like 50S ribosomal protein L15, chloroplastic 50S ribosomal protein L15, chloroplastic large ribosomal subunit protein uL15c 50S ribosomal protein L15, chloroplastic large ribosomal subunit protein uL15c-like large ribosomal subunit protein uL15c large ribosomal subunit protein uL15c 50S ribosomal protein L15, chloroplastic-like 50S ribosomal protein L15, chloroplastic 50S ribosomal protein L15, chloroplastic 50S ribosomal protein L15, chloroplastic 50S ribosomal protein L15, chloroplastic 50S ribosomal protein L15, chloroplastic 50S ribosomal protein L15, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
bra00860 Porphyrin metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi03060 Protein export 2
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00030 Pentose phosphate pathway 2
ghi00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 15
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
ghi03060 Protein export 2
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00030 Pentose phosphate pathway 2
ghi00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta03060 Protein export 2
nta00270 Cysteine and methionine metabolism 2
nta00920 Sulfur metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta03060 Protein export 2
nta00270 Cysteine and methionine metabolism 2
nta00920 Sulfur metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
sbi00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 15
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100268043 822189 100306183 103839350 18102568 7488360 25485490 107909570 107898822 107886635 106418276 106349417 106415661 102618960 101255295 102604819 107768370 107782923 4332089 100273366 123098216 123092943 123085150 123449289 8056875 100827203 5724584
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