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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100273064   RNA-binding (RRM/RBD/RNP motifs) family protein 
 zma-r.6   100273064   RNA-binding (RRM/RBD/RNP motifs) family protein 
 zma-m.5   100273064   RNA-binding (RRM/RBD/RNP motifs) family protein 
 osa-u.5   4328244   protein REPRESSOR OF SILENCING 3 
 ath-u.5   ROS3   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100778779   protein REPRESSOR OF SILENCING 3 
 gma-u.5   100808161   protein REPRESSOR OF SILENCING 3 
 sly-u.5   101264949   protein REPRESSOR OF SILENCING 3-like 
 sly-u.5   101264344   uncharacterized LOC101264344 
 vvi-u.5   104879881   protein REPRESSOR OF SILENCING 3 
 ppo-u.5   18107900   protein REPRESSOR OF SILENCING 3 
 mtr-u.5   11422911   protein REPRESSOR OF SILENCING 3 

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Top 50 coexpressed genes to 100273064 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100273064 (zma-u.5 coexpression data)

CoexMap"100273064"


zmaLOC100273064 | Entrez gene ID : 100273064      
Species zma osa ath gma sly vvi ppo mtr tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 3 1 1 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
Protein NP_001140985.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1  (predict for NP_001140985.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_001140985.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100273064

.
zma-r.6
for
100273064

.
zma-m.5
for
100273064

.
osa-u.5
for
4328244

.
ath-u.5
for
ROS3

.
gma-u.5
for
100778779

.
gma-u.5
for
100808161

.
sly-u.5
for
101264949

.
sly-u.5
for
101264344

.
vvi-u.5
for
104879881

.
ppo-u.5
for
18107900

.
mtr-u.5
for
11422911

.


Ortholog ID: 7002
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae ghi ghi bna cre sbi sot sot cit bdi nta nta
Symbol ROS3 LOC100778779 LOC100808161 LOC101264949 LOC4328244 LOC100273064 LOC103845247 LOC104879881 LOC18107900 LOC11422911 LOC123132170 LOC123143708 LOC121204870 LOC107926250 LOC106426062 CHLRE_14g633400v5 LOC8062819 LOC102581552 LOC107059321 LOC102607721 LOC100845300 LOC107785286 LOC107760342
Function* RNA-binding (RRM/RBD/RNP motifs) family protein protein REPRESSOR OF SILENCING 3 protein REPRESSOR OF SILENCING 3 protein REPRESSOR OF SILENCING 3-like protein REPRESSOR OF SILENCING 3 RNA-binding (RRM/RBD/RNP motifs) family protein dentin sialophosphoprotein protein REPRESSOR OF SILENCING 3 protein REPRESSOR OF SILENCING 3 protein REPRESSOR OF SILENCING 3 protein REPRESSOR OF SILENCING 3 protein REPRESSOR OF SILENCING 3 protein REPRESSOR OF SILENCING 3 protein REPRESSOR OF SILENCING 3 protein REPRESSOR OF SILENCING 3 uncharacterized protein uncharacterized LOC8062819 uncharacterized LOC102581552 histone-lysine N-methyltransferase SETD1B-like protein REPRESSOR OF SILENCING 3 uncharacterized LOC100845300 uncharacterized LOC107785286 uncharacterized LOC107760342
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi03013 Nucleocytoplasmic transport 3
ghi00790 Folate biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi03013 Nucleocytoplasmic transport 3
ghi00790 Folate biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 3
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835925 100778779 100808161 101264949 4328244 100273064 103845247 104879881 18107900 11422911 123132170 123143708 121204870 107926250 106426062 66056358 8062819 102581552 107059321 102607721 100845300 107785286 107760342
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