ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100273342	uncharacterized LOC100273342
zma-r.6	100273342	uncharacterized LOC100273342
zma-m.5	100273342	uncharacterized LOC100273342
zma-u.5	100280963	ATP-dependent Clp protease proteolytic subunit
zma-u.5	100284211	uncharacterized LOC100284211
zma-u.5	100284276	ATP-dependent Clp protease proteolytic subunit
osa-u.5	4330071	uncharacterized LOC4330071
osa-u.5	4336449	uncharacterized LOC4336449
ath-u.5	NCLPP7	nuclear-encoded CLP protease P7
gma-u.5	100782585	ATP-dependent Clp protease proteolytic subunit 2, mitochondrial
gma-u.5	100791303	ATP-dependent Clp protease proteolytic subunit 2, mitochondrial
sly-u.5	101262101	ATP-dependent Clp protease proteolytic subunit
vvi-u.5	100266180	ATP-dependent Clp protease proteolytic subunit 2, mitochondrial
ppo-u.5	7456312	ATP-dependent Clp protease proteolytic subunit 2, mitochondrial
ppo-u.5	18099086	ATP-dependent Clp protease proteolytic subunit 2, mitochondrial
mtr-u.5	11445434	ATP-dependent Clp protease proteolytic subunit 2, mitochondrial

Annotation

functional annotation

KEGG

GO BP

GO:0006515 [list] [network] protein quality control for misfolded or incompletely synthesized proteins

(20 genes)

IEA

GO CC

GO:0009368 [list] [network] endopeptidase Clp complex

(13 genes)

IEA

GO MF

GO:0051117 [list] [network] ATPase binding	(20 genes)	IEA
GO:0004176 [list] [network] ATP-dependent peptidase activity	(36 genes)	IEA
GO:0004252 [list] [network] serine-type endopeptidase activity	(139 genes)	IEA

Protein

NP_001141255.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9

(predict for NP_001141255.1)

Subcellular
localization
TargetP

chlo 9

(predict for NP_001141255.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100273342	zma-r.6 for 100273342	zma-m.5 for 100273342	zma-u.5 for 100280963	zma-u.5 for 100284211	zma-u.5 for 100284276	osa-u.5 for 4330071	osa-u.5 for 4336449	ath-u.5 for NCLPP7	gma-u.5 for 100782585	gma-u.5 for 100791303	sly-u.5 for 101262101	vvi-u.5 for 100266180	ppo-u.5 for 7456312	ppo-u.5 for 18099086	mtr-u.5 for 11445434

Ortholog

Ortholog ID: 4293

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

NCLPP7

Function^*

uncharacterized LOC100284211

ATP-dependent Clp protease proteolytic subunit

ATP-dependent Clp protease proteolytic subunit-like

uncharacterized LOC4336449

uncharacterized LOC4330071

ATP-dependent Clp protease proteolytic subunit

ATP-dependent Clp protease proteolytic subunit-like

ATP-dependent Clp protease proteolytic subunit

nuclear-encoded CLP protease P7

ATP-dependent Clp protease proteolytic subunit 2, mitochondrial

ATP-dependent Clp protease proteolytic subunit

ATP-dependent Clp protease proteolytic subunit 2, mitochondrial

ATP-dependent Clp protease proteolytic subunit 2, mitochondrial-like

ATP-dependent Clp protease proteolytic subunit 2, mitochondrial

ATP-dependent Clp protease proteolytic subunit 2, mitochondrial-like

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03015	mRNA surveillance pathway	2
zma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	5
sbi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00900	Terpenoid backbone biosynthesis	3
tae00906	Carotenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03060	Protein export	4
tae04141	Protein processing in endoplasmic reticulum	4
tae04145	Phagosome	4
tae00220	Arginine biosynthesis	3
tae01210	2-Oxocarboxylic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	3
hvu03050	Proteasome	3
hvu00190	Oxidative phosphorylation	3
hvu01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	2
hvu03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	3
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	5
sly03010	Ribosome	4
sly04142	Lysosome	4
sly04145	Phagosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03050	Proteasome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03018	RNA degradation	3
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03050	Proteasome	10
mtr00220	Arginine biosynthesis	2
mtr00250	Alanine, aspartate and glutamate metabolism	2
mtr01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04136	Autophagy - other	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04136	Autophagy - other	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	4
sot00020	Citrate cycle (TCA cycle)	2
sot00640	Propanoate metabolism	2
sot01200	Carbon metabolism	2
sot00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	3
sot03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03050	Proteasome	10
cit00190	Oxidative phosphorylation	4
cit04145	Phagosome	2
cit03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00230	Purine metabolism	4
nta04626	Plant-pathogen interaction	3
nta00030	Pentose phosphate pathway	2
nta01200	Carbon metabolism	2
nta01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00230	Purine metabolism	4
nta00030	Pentose phosphate pathway	2
nta01200	Carbon metabolism	2
nta01230	Biosynthesis of amino acids	2
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00500	Starch and sucrose metabolism	2
cre00010	Glycolysis / Gluconeogenesis	2
cre00030	Pentose phosphate pathway	2
cre00051	Fructose and mannose metabolism	2
cre00052	Galactose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100284211

100284276

8066188

110436091

4336449

4330071

123137576

123189840

123401768

123427290

100822145

100828358

832378

100791303

100782585

101262101

103847140

100266180

7456312

18099086

11445434

107894040

121203022

111208781

106433878

102601523

102596270

102607174

107770894

107770396

5722570

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100273342 (zma-u.5 coexpression data)

Top 50 enrichment test to 100273342 (zma-u.5 coexpression data)


Species	zma	osa	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	6	2	1	2	1	1	2	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100273342 (zma-u.5 coexpression data)

Top 50 enrichment test to 100273342 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**