ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	100273505	40S ribosomal protein S10-1
zma-r.6	100273505	40S ribosomal protein S10-1
zma-m.5	100273505	40S ribosomal protein S10-1
zma-u.5	100286375	40S ribosomal protein S10
zma-u.5	100282542	40S ribosomal protein S10
zma-u.5	100276789	40S ribosomal protein S10-like
osa-u.5	4329619	40S ribosomal protein S10-1-like
osa-u.5	4324553	small ribosomal subunit protein eS10z-like
osa-u.5	4335865	40S ribosomal protein S10-1-like
ath-u.5	AT4G25740	RNA binding Plectin/S10 domain-containing protein
ath-u.5	RPS10B	RNA binding Plectin/S10 domain-containing protein
ath-u.5	AT5G52650	RNA binding Plectin/S10 domain-containing protein
gma-u.5	100803556	40S ribosomal protein S10-1
gma-u.5	100797787	uncharacterized LOC100797787
sly-u.5	101253268	small ribosomal subunit protein eS10z
sly-u.5	101253133	small ribosomal subunit protein eS10z
vvi-u.5	100243340	small ribosomal subunit protein eS10z
vvi-u.5	100257720	small ribosomal subunit protein eS10z
ppo-u.5	18098840	40S ribosomal protein S10-1
ppo-u.5	18104043	40S ribosomal protein S10-1
ppo-u.5	18106464	40S ribosomal protein S10-1
mtr-u.5	25494515	40S ribosomal protein S10-1
mtr-u.5	25502097	40S ribosomal protein S10-1

Top 50 coexpressed genes to 100273505 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100273505 (zma-u.5 coexpression data)

CoexMap"100273505"

[Cytoscape]

Annotation

functional annotation

KEGG

zma03010 [list] [network] Ribosome (2925 genes)

GO BP

GO CC

GO:0022627 [list] [network] cytosolic small ribosomal subunit

(70 genes)

IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome	(479 genes)	IEA
GO:0003723 [list] [network] RNA binding	(1549 genes)	IEA

Protein

NP_001141403.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 7, nucl 1, mito 1

(predict for NP_001141403.1)

Subcellular
localization
TargetP

other 8, mito 3

(predict for NP_001141403.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100273505	zma-r.6 for 100273505	zma-m.5 for 100273505	zma-u.5 for 100286375	zma-u.5 for 100282542	zma-u.5 for 100276789	osa-u.5 for 4329619	osa-u.5 for 4324553	osa-u.5 for 4335865	ath-u.5 for AT4G25740	ath-u.5 for RPS10B	ath-u.5 for AT5G52650	gma-u.5 for 100803556	gma-u.5 for 100797787	sly-u.5 for 101253268	sly-u.5 for 101253133	vvi-u.5 for 100243340	vvi-u.5 for 100257720	ppo-u.5 for 18098840	ppo-u.5 for 18104043	ppo-u.5 for 18106464	mtr-u.5 for 25494515	mtr-u.5 for 25502097

Ortholog

Ortholog ID: 1631

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

40S ribosomal protein S10-like

40S ribosomal protein S10-1

40S ribosomal protein S10-1-like

small ribosomal subunit protein eS10z-like

40S ribosomal protein S10-1

40S ribosomal protein S10-1-like

40S ribosomal protein S10-1

RNA binding Plectin/S10 domain-containing protein

uncharacterized LOC100797787

40S ribosomal protein S10-1

small ribosomal subunit protein eS10z

40S ribosomal protein S10-2

40S ribosomal protein S10-1

small ribosomal subunit protein eS10z

40S ribosomal protein S10-1

40S ribosomal protein S10-2-like

40S ribosomal protein S10-2

40S ribosomal protein S10-like

40S ribosomal protein S10-1

small ribosomal subunit protein eS10z-like

small ribosomal subunit protein eS10z

ribosomal protein S10;uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	19
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	21
bdi04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	16
sly03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	19
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	19
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	21
mtr04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	13
cre00220	Arginine biosynthesis	2
cre00250	Alanine, aspartate and glutamate metabolism	2
cre00630	Glyoxylate and dicarboxylate metabolism	2
cre00910	Nitrogen metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100276789

100273505

8074001

8074109

4329619

4324553

123063557

123053318

123445610

123426730

100830752

100825191

828679

835342

100797787

100803556

101253133

101253268

103864088

103861589

100243340

100257720

18106464

18097546

25502097

25494515

107890692

107947792

125607953

111212833

102604938

102577552

102627721

102616288

107780640

107829891

5722288

The preparation time of this page was 0.5 [sec].


Species	zma	osa	ath	gma	sly	vvi	ppo	mtr	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	6	3	3	2	2	2	3	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100273505 (zma-u.5 coexpression data)

Top 50 enrichment test to 100273505 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**