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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100273784   ENTH/VHS family protein 
 zma-r.6   100273784   ENTH/VHS family protein 
 zma-u.5   100278822   uncharacterized LOC100278822 
 zma-u.5   100275719   uncharacterized LOC100275719 
 zma-u.5   100382152   uncharacterized LOC100382152 
 osa-u.5   4351389   UPF0400 protein C337.03 
 osa-u.5   4349670   uncharacterized LOC4349670 
 osa-u.5   4337145   uncharacterized LOC4337145 
 ath-u.5   AT3G26990   ENTH/VHS family protein 
 ath-u.5   AT5G10060   ENTH/VHS family protein 
 ath-u.5   AT5G65180   ENTH/VHS family protein 
 gma-u.5   100815709   uncharacterized LOC100815709 
 gma-u.5   100808335   regulation of nuclear pre-mRNA domain-containing protein 1A 
 gma-u.5   100806108   regulation of nuclear pre-mRNA domain-containing protein 1A 
 sly-u.5   101266382   uncharacterized LOC101266382 
 sly-u.5   101245837   uncharacterized LOC101245837 
 sly-u.5   101261976   uncharacterized LOC101261976 
 vvi-u.5   100257727   uncharacterized LOC100257727 
 vvi-u.5   100250127   uncharacterized LOC100250127 
 vvi-u.5   100250806   uncharacterized LOC100250806 
 ppo-u.5   7456257   UPF0400 protein C337.03 
 ppo-u.5   18100965   uncharacterized LOC18100965 
 ppo-u.5   7477107   uncharacterized LOC7477107 
 mtr-u.5   11422191   regulation of nuclear pre-mRNA domain-containing protein 1B 
 mtr-u.5   11427699   regulation of nuclear pre-mRNA domain-containing protein 1A 
 mtr-u.5   11442951   regulation of nuclear pre-mRNA domain-containing protein 1A 

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Top 50 coexpressed genes to 100273784 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100273784 (zma-u.5 coexpression data)

CoexMap"100273784"


zmaLOC100273784 | Entrez gene ID : 100273784      
Species zma osa ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 5 3 3 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031124 [list] [network] mRNA 3'-end processing  (24 genes)  IEA  
GO CC
GO MF
GO:0000993 [list] [network] RNA polymerase II complex binding  (31 genes)  IEA  
Protein NP_001141659.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  cyto 1,  mito 1,  extr 1,  cysk 1  (predict for NP_001141659.1)
Subcellular
localization
TargetP
other 2  (predict for NP_001141659.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100273784
zma-r.6
for
100273784
zma-u.5
for
100278822
zma-u.5
for
100275719
zma-u.5
for
100382152
osa-u.5
for
4351389
osa-u.5
for
4349670
osa-u.5
for
4337145
ath-u.5
for
AT3G26990
ath-u.5
for
AT5G10060
ath-u.5
for
AT5G65180
gma-u.5
for
100815709
gma-u.5
for
100808335
gma-u.5
for
100806108
sly-u.5
for
101266382
sly-u.5
for
101245837
sly-u.5
for
101261976
vvi-u.5
for
100257727
vvi-u.5
for
100250127
vvi-u.5
for
100250806
ppo-u.5
for
7456257
ppo-u.5
for
18100965
ppo-u.5
for
7477107
mtr-u.5
for
11422191
mtr-u.5
for
11427699
mtr-u.5
for
11442951


Ortholog ID: 1017
Species zma zma sbi sbi osa osa tae tae hvu hvu bdi bdi ath ath gma gma sly sly bra bra vvi vvi ppo ppo mtr mtr ghi ghi bna bna sot sot cit cit nta nta cre
Symbol LOC100275719 LOC100384037 LOC8068447 LOC8083053 LOC4327230 LOC4351389 LOC123119886 LOC123120431 LOC123445280 LOC123452771 LOC100845741 LOC100837105 AT5G65180 AT3G26990 LOC100800067 LOC100815709 LOC101245837 LOC101261976 LOC103836971 LOC103850345 LOC100250127 LOC100249768 LOC7456257 LOC7477107 LOC11442951 LOC11427699 LOC107948370 LOC107890033 LOC106376974 LOC106384910 LOC102584323 LOC102580771 LOC102628356 LOC102614365 LOC107787582 LOC107825766 CHLRE_11g481900v5
Function* uncharacterized LOC100275719 zinc finger homeobox protein 4 regulation of nuclear pre-mRNA domain-containing protein 1A actin cytoskeleton-regulatory complex protein PAN1 uncharacterized LOC4327230 UPF0400 protein C337.03 regulation of nuclear pre-mRNA domain-containing protein 1A regulation of nuclear pre-mRNA domain-containing protein 2 UPF0400 protein C337.03-like protein enabled homolog proline-rich protein 36 regulation of nuclear pre-mRNA domain-containing protein 1A ENTH/VHS family protein ENTH/VHS family protein regulation of nuclear pre-mRNA domain-containing protein 1A uncharacterized LOC100815709 uncharacterized LOC101245837 uncharacterized LOC101261976 regulation of nuclear pre-mRNA domain-containing protein 1B regulation of nuclear pre-mRNA domain-containing protein 1A uncharacterized LOC100250127 uncharacterized LOC100249768 UPF0400 protein C337.03 uncharacterized LOC7477107 regulation of nuclear pre-mRNA domain-containing protein 1A regulation of nuclear pre-mRNA domain-containing protein 1A regulation of nuclear pre-mRNA domain-containing protein 1B regulation of nuclear pre-mRNA domain-containing protein 1B regulation of nuclear pre-mRNA domain-containing protein 1A regulation of nuclear pre-mRNA domain-containing protein 1A-like uncharacterized LOC102584323 regulation of nuclear pre-mRNA domain-containing protein 1B uncharacterized LOC102628356 uncharacterized LOC102614365 uncharacterized LOC107787582 uncharacterized LOC107825766 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 4
osa03250 Viral life cycle - HIV-1 3
osa03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 2
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
sly03040 Spliceosome 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 6
bra03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 3
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03013 Nucleocytoplasmic transport 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00310 Lysine degradation 2
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 3
sot03008 Ribosome biogenesis in eukaryotes 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 6
nta04382 Cornified envelope formation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 7
cre03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100275719 100384037 8068447 8083053 4327230 4351389 123119886 123120431 123445280 123452771 100845741 100837105 836642 822316 100800067 100815709 101245837 101261976 103836971 103850345 100250127 100249768 7456257 7477107 11442951 11427699 107948370 107890033 106376974 106384910 102584323 102580771 102628356 102614365 107787582 107825766 66055366
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