ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	100273826	uncharacterized LOC100273826
zma-r.6	100273826	uncharacterized LOC100273826
zma-m.5	100273826	uncharacterized LOC100273826
zma-u.5	100192652	uncharacterized LOC100192652
zma-u.5	100191672	uncharacterized LOC100191672
zma-u.5	100194244	uncharacterized LOC100194244
sbi-r.1	8070798	stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic
sbi-r.1	8061464	stearoyl-[acyl-carrier-protein] 9-desaturase 1, chloroplastic
sbi-r.1	8059364	stearoyl-[acyl-carrier-protein] 9-desaturase 2, chloroplastic
osa-u.5	4324844	stearoyl-[acyl-carrier-protein] 9-desaturase 1, chloroplastic-like
osa-u.5	4327738	stearoyl-[acyl-carrier-protein] 9-desaturase 2, chloroplastic-like
tae-r.2	123045284	stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic
tae-r.2	123062959	stearoyl-[acyl-carrier-protein] 9-desaturase 1, chloroplastic
tae-r.2	123071997	stearoyl-[acyl-carrier-protein] 9-desaturase 2, chloroplastic
hvu-r.1	123445137	stearoyl-[acyl-carrier-protein] 9-desaturase 1, chloroplastic-like
hvu-r.1	123426508	stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic
bdi-r.1	100846588	stearoyl-[acyl-carrier-protein] 9-desaturase 1, chloroplastic
bdi-r.1	100846692	stearoyl-[acyl-carrier-protein] 9-desaturase 2, chloroplastic
ath-u.5	SSI2	Plant stearoyl-acyl-carrier-protein desaturase family protein
ath-u.5	AT3G02610	plant stearoyl-acyl-carrier desaturase family protein
gma-u.5	SAD2	stearoyl-ACP desaturase 2
gma-u.5	ACPD	stearoyl-acyl carrier protein desaturase
gma-u.5	SACPD	stearoyl-acyl carrier protein desaturase
sly-u.5	101246830	stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic
sly-u.5	101250561	stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic
sly-u.5	101245664	stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic-like
bra-r.6	103846344	stearoyl-[acyl-carrier-protein] 9-desaturase 3, chloroplastic
bra-r.6	103858976	stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic
bra-r.6	103846343	stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic
vvi-u.5	100853715	stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic
vvi-u.5	100267952	stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic
vvi-u.5	100255873	stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic
ppo-u.5	18104593	stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic
ppo-u.5	7469201	stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic
mtr-u.5	11413449	stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic
mtr-u.5	11415358	stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic
ghi-r.1	107914601	stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic
ghi-r.1	107960621	stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic
ghi-r.1	107950692	stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic
bna-r.1	111197705	stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic-like
bna-r.1	106447152	stearoyl-[acyl-carrier-protein] 9-desaturase, seed specific, chloroplastic-like
bna-r.1	106438946	stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic
sot-r.1	102577562	stearoyl-acyl carrier protein desaturase
sot-r.1	102592490	stearoyl-[acyl-carrier-protein] 9-desaturase 1, chloroplastic-like
sot-r.1	102592828	stearoyl-[acyl-carrier-protein] 9-desaturase 1, chloroplastic-like
cit-r.1	102609735	stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic-like
cit-r.1	102618601	stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic-like
cit-r.1	102619477	stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic
nta-r.1	107830822	stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic
nta-r.1	107790638	stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic-like
cre-r.1	CHLRE_17g701700v5	uncharacterized protein

Top 50 coexpressed genes to 100273826 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100273826 (zma-u.5 coexpression data)

CoexMap"100273826"

[Cytoscape]

Annotation

functional annotation

KEGG

zma00061 [list] [network] Fatty acid biosynthesis (56 genes)

zma01040 [list] [network] Biosynthesis of unsaturated fatty acids (35 genes)

zma01212 [list] [network] Fatty acid metabolism (90 genes)

GO BP

GO:0006631 [list] [network] fatty acid metabolic process

(191 genes)

IEA

GO CC

GO:0009570 [list] [network] chloroplast stroma

(118 genes)

IEA

GO MF

GO:0045300 [list] [network] stearoyl-[ACP] desaturase activity

(11 genes)

IEA

Protein

NP_001141697.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, mito 1

(predict for NP_001141697.2)

Subcellular
localization
TargetP

chlo 7, mito 6

(predict for NP_001141697.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100273826	zma-r.6 for 100273826	zma-m.5 for 100273826	zma-u.5 for 100192652	zma-u.5 for 100191672	zma-u.5 for 100194244	sbi-r.1 for 8070798	sbi-r.1 for 8061464	sbi-r.1 for 8059364	osa-u.5 for 4324844	osa-u.5 for 4327738	tae-r.2 for 123045284	tae-r.2 for 123062959	tae-r.2 for 123071997	hvu-r.1 for 123445137	hvu-r.1 for 123426508	bdi-r.1 for 100846588	bdi-r.1 for 100846692	ath-u.5 for SSI2	ath-u.5 for AT3G02610	gma-u.5 for SAD2	gma-u.5 for ACPD	gma-u.5 for SACPD	sly-u.5 for 101246830	sly-u.5 for 101250561	sly-u.5 for 101245664	bra-r.6 for 103846344	bra-r.6 for 103858976	bra-r.6 for 103846343	vvi-u.5 for 100853715	vvi-u.5 for 100267952	vvi-u.5 for 100255873	ppo-u.5 for 18104593	ppo-u.5 for 7469201	mtr-u.5 for 11413449	mtr-u.5 for 11415358	ghi-r.1 for 107914601	ghi-r.1 for 107960621	ghi-r.1 for 107950692	bna-r.1 for 111197705	bna-r.1 for 106447152	bna-r.1 for 106438946	sot-r.1 for 102577562	sot-r.1 for 102592490	sot-r.1 for 102592828	cit-r.1 for 102609735	cit-r.1 for 102618601	cit-r.1 for 102619477	nta-r.1 for 107830822	nta-r.1 for 107790638	cre-r.1 for CHLRE_17g701700v5

Ortholog

Ortholog ID: 640

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

SSI2

FTM1

ACPD

SACPD

SACPD-C

Function^*

uncharacterized LOC100273826

uncharacterized LOC100192652

acyl-[acyl-carrier-protein] desaturase

stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic

stearoyl-[acyl-carrier-protein] 9-desaturase 1, chloroplastic

stearoyl-[acyl-carrier-protein] 9-desaturase 2, chloroplastic-like

stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic-like

stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic

stearoyl-[acyl-carrier-protein] 9-desaturase 2, chloroplastic

stearoyl-[acyl-carrier-protein] 9-desaturase 1, chloroplastic-like

stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic

stearoyl-[acyl-carrier-protein] 9-desaturase 2, chloroplastic

stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic

Plant stearoyl-acyl-carrier-protein desaturase family protein

stearoyl-acyl carrier protein desaturase

stearoyl-ACP desaturase

stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic

stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic-like

stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic

stearoyl-[acyl-carrier-protein] 9-desaturase, seed specific, chloroplastic

stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic

stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic

stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic

stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic

stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic-like

stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic

stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic-like

stearoyl-[acyl-carrier-protein] 9-desaturase 1, chloroplastic-like

stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic-like

stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic

stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic-like

stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic-like

stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic

stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic-like

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00620	Pyruvate metabolism	9
zma00061	Fatty acid biosynthesis	8
zma01212	Fatty acid metabolism	8
zma01210	2-Oxocarboxylic acid metabolism	7
zma00010	Glycolysis / Gluconeogenesis	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00062	Fatty acid elongation	2
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01040	Biosynthesis of unsaturated fatty acids	2
osa01212	Fatty acid metabolism	2
osa03008	Ribosome biogenesis in eukaryotes	2
osa00290	Valine, leucine and isoleucine biosynthesis	2
osa00770	Pantothenate and CoA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	5
osa04120	Ubiquitin mediated proteolysis	2
osa04144	Endocytosis	2
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	13
tae00061	Fatty acid biosynthesis	3
tae01040	Biosynthesis of unsaturated fatty acids	3
tae01212	Fatty acid metabolism	3
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	4
tae04141	Protein processing in endoplasmic reticulum	4
tae00061	Fatty acid biosynthesis	3
tae01040	Biosynthesis of unsaturated fatty acids	3
tae01212	Fatty acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	3
tae00061	Fatty acid biosynthesis	3
tae01040	Biosynthesis of unsaturated fatty acids	3
tae01212	Fatty acid metabolism	3
tae00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	7
hvu03060	Protein export	2
hvu00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00350	Tyrosine metabolism	3
bdi00360	Phenylalanine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00620	Pyruvate metabolism	8
ath01200	Carbon metabolism	7
ath00061	Fatty acid biosynthesis	7
ath01212	Fatty acid metabolism	7
ath00010	Glycolysis / Gluconeogenesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00061	Fatty acid biosynthesis	2
ath01040	Biosynthesis of unsaturated fatty acids	2
ath01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00010	Glycolysis / Gluconeogenesis	2
ath00350	Tyrosine metabolism	2
ath00270	Cysteine and methionine metabolism	2
ath00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00620	Pyruvate metabolism	9
gma01200	Carbon metabolism	9
gma00010	Glycolysis / Gluconeogenesis	8
gma01210	2-Oxocarboxylic acid metabolism	6
gma00020	Citrate cycle (TCA cycle)	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	5
gma00620	Pyruvate metabolism	3
gma00071	Fatty acid degradation	2
gma00350	Tyrosine metabolism	2
gma00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	3
sly04626	Plant-pathogen interaction	2
sly00030	Pentose phosphate pathway	2
sly01200	Carbon metabolism	2
sly01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00010	Glycolysis / Gluconeogenesis	3
sly00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00061	Fatty acid biosynthesis	3
sly01040	Biosynthesis of unsaturated fatty acids	3
sly01212	Fatty acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00541	Biosynthesis of various nucleotide sugars	4
bra01250	Biosynthesis of nucleotide sugars	4
bra00061	Fatty acid biosynthesis	2
bra01040	Biosynthesis of unsaturated fatty acids	2
bra01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01200	Carbon metabolism	3
vvi01230	Biosynthesis of amino acids	3
vvi00330	Arginine and proline metabolism	3
vvi00010	Glycolysis / Gluconeogenesis	2
vvi00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00061	Fatty acid biosynthesis	3
vvi01040	Biosynthesis of unsaturated fatty acids	3
vvi01212	Fatty acid metabolism	3
vvi00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	4
vvi01040	Biosynthesis of unsaturated fatty acids	2
vvi01212	Fatty acid metabolism	2
vvi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00940	Phenylpropanoid biosynthesis	5
mtr00380	Tryptophan metabolism	5
mtr00071	Fatty acid degradation	4
mtr00061	Fatty acid biosynthesis	3
mtr01212	Fatty acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00061	Fatty acid biosynthesis	4
ghi01040	Biosynthesis of unsaturated fatty acids	4
ghi01212	Fatty acid metabolism	4
ghi04141	Protein processing in endoplasmic reticulum	3
ghi00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	4
ghi00061	Fatty acid biosynthesis	4
ghi01040	Biosynthesis of unsaturated fatty acids	4
ghi01212	Fatty acid metabolism	4
ghi00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00061	Fatty acid biosynthesis	6
ghi01040	Biosynthesis of unsaturated fatty acids	6
ghi01212	Fatty acid metabolism	6
ghi00260	Glycine, serine and threonine metabolism	3
ghi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00061	Fatty acid biosynthesis	4
bna01040	Biosynthesis of unsaturated fatty acids	4
bna01212	Fatty acid metabolism	4
bna04141	Protein processing in endoplasmic reticulum	3
bna00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00061	Fatty acid biosynthesis	4
bna01040	Biosynthesis of unsaturated fatty acids	4
bna01212	Fatty acid metabolism	4
bna00562	Inositol phosphate metabolism	2
bna00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00061	Fatty acid biosynthesis	4
bna01040	Biosynthesis of unsaturated fatty acids	4
bna01212	Fatty acid metabolism	4
bna00562	Inositol phosphate metabolism	2
bna00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00061	Fatty acid biosynthesis	5
sot01040	Biosynthesis of unsaturated fatty acids	5
sot01212	Fatty acid metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00061	Fatty acid biosynthesis	5
sot01040	Biosynthesis of unsaturated fatty acids	5
sot01212	Fatty acid metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03015	mRNA surveillance pathway	2
sot04016	MAPK signaling pathway - plant	2
sot04070	Phosphatidylinositol signaling system	2
sot04075	Plant hormone signal transduction	2
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00940	Phenylpropanoid biosynthesis	3
cit04146	Peroxisome	3
cit01040	Biosynthesis of unsaturated fatty acids	2
cit01200	Carbon metabolism	2
cit01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00010	Glycolysis / Gluconeogenesis	7
cit00071	Fatty acid degradation	3
cit00350	Tyrosine metabolism	3
cit00592	alpha-Linolenic acid metabolism	3
cit00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	6
nta00350	Tyrosine metabolism	4
nta00220	Arginine biosynthesis	2
nta00250	Alanine, aspartate and glutamate metabolism	2
nta00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00620	Pyruvate metabolism	7
nta01200	Carbon metabolism	7
nta00010	Glycolysis / Gluconeogenesis	6
nta00020	Citrate cycle (TCA cycle)	6
nta00785	Lipoic acid metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01212	Fatty acid metabolism	4
cre01200	Carbon metabolism	3
cre00061	Fatty acid biosynthesis	3
cre01240	Biosynthesis of cofactors	3
cre00010	Glycolysis / Gluconeogenesis	2

Expression

Expression pattern

Entrez Gene ID^*

100273826

100192652

100272745

8070798

8061464

4327738

4335627

123045284

123189029

123080290

123445137

123426508

100846692

100830577

818973

820737

840977

547808

100816146

100037478

101246830

101250561

101257379

103858976

103866745

100255873

100252677

100242444

18104593

11415358

107960621

107950692

107920978

111197705

106438946

125575175

102592828

102594141

102601511

102609735

102618601

102619477

107830822

107790638

5717289

The preparation time of this page was 0.2 [sec].


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	6	3	2	3	2	2	2	3	3	3	3	2	2	3	3	3	3	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100273826 (zma-u.5 coexpression data)

Top 50 enrichment test to 100273826 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**