ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	100275358	putative MAP kinase superfamily protein
zma-r.6	100275358	putative MAP kinase superfamily protein
zma-u.5	100279294	uncharacterized LOC100279294
zma-u.5	100272734	uncharacterized LOC100272734
zma-u.5	100383481	putative MAP kinase superfamily protein
sbi-r.1	8063264	G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520
sbi-r.1	8078939	mitogen-activated protein kinase kinase kinase 3
sbi-r.1	8054301	mitogen-activated protein kinase kinase kinase 1
osa-u.5	9271851	mitogen-activated protein kinase kinase kinase 1
osa-u.5	4333845	mitogen-activated protein kinase kinase kinase 1
osa-u.5	4330859	mitogen-activated protein kinase kinase kinase 1
tae-r.2	123083936	mitogen-activated protein kinase kinase kinase 1b
tae-r.2	123085355	mitogen-activated protein kinase kinase kinase 1
tae-r.2	123092689	mitogen-activated protein kinase kinase kinase 1
hvu-r.1	123450189	uncharacterized LOC123450189
hvu-r.1	123449095	mitogen-activated protein kinase kinase kinase 1-like
hvu-r.1	123403898	mitogen-activated protein kinase kinase kinase 1-like
bdi-r.1	100826299	uncharacterized LOC100826299
bdi-r.1	100826357	mitogen-activated protein kinase kinase kinase 1
bdi-r.1	100825446	mitogen-activated protein kinase kinase kinase 1
ath-u.5	MEKK3	MAPK/ERK kinase kinase 3
ath-u.5	MAPKKK9	mitogen-activated protein kinase kinase kinase 9
ath-u.5	MEKK1	MAPK/ERK kinase kinase 1
gma-u.5	100820552	mitogen-activated protein kinase kinase kinase 1
gma-u.5	100778553	mitogen-activated protein kinase kinase kinase 1
gma-u.5	100798028	mitogen-activated protein kinase kinase kinase 1
sly-u.5	101264342	mitogen-activated protein kinase kinase kinase 1-like
sly-u.5	101263165	mitogen-activated protein kinase kinase kinase 1-like
bra-r.6	103838792	mitogen-activated protein kinase kinase kinase 1
bra-r.6	103858480	mitogen-activated protein kinase kinase kinase 1
bra-r.6	103871108	mitogen-activated protein kinase kinase kinase 1
vvi-u.5	100264591	mitogen-activated protein kinase kinase kinase 1
vvi-u.5	100264291	mitogen-activated protein kinase kinase kinase 1
ppo-u.5	7463181	mitogen-activated protein kinase kinase kinase 1
ppo-u.5	7460930	mitogen-activated protein kinase kinase kinase 1
mtr-u.5	25493333	mitogen-activated protein kinase kinase kinase 1
mtr-u.5	11431495	mitogen-activated protein kinase kinase kinase 1
mtr-u.5	11436045	mitogen-activated protein kinase kinase kinase 1
ghi-r.1	107942035	mitogen-activated protein kinase kinase kinase 1
ghi-r.1	107910263	mitogen-activated protein kinase kinase kinase 1
ghi-r.1	107951438	mitogen-activated protein kinase kinase kinase 1
bna-r.1	111213496	mitogen-activated protein kinase kinase kinase 1
bna-r.1	106367654	mitogen-activated protein kinase kinase kinase 1
bna-r.1	106345807	mitogen-activated protein kinase kinase kinase 1-like
sot-r.1	102597910	mitogen-activated protein kinase kinase kinase 1-like
sot-r.1	102593900	mitogen-activated protein kinase kinase kinase 1-like
cit-r.1	102625693	mitogen-activated protein kinase kinase kinase 1-like
cit-r.1	102609376	mitogen-activated protein kinase kinase kinase 1
cit-r.1	102609173	mitogen-activated protein kinase kinase kinase 1-like
nta-r.1	107795279	mitogen-activated protein kinase kinase kinase 1
nta-r.1	107766395	mitogen-activated protein kinase kinase kinase 1
nta-r.1	107806104	mitogen-activated protein kinase kinase kinase 1

Top 50 coexpressed genes to 100275358 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100275358 (zma-u.5 coexpression data)

CoexMap"100275358"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0000165 [list] [network] MAPK cascade	(23 genes)	IEA
GO:0006468 [list] [network] protein phosphorylation	(1372 genes)	IEA

GO CC

GO:0005737 [list] [network] cytoplasm

(5465 genes)

IEA

GO MF

GO:0004709 [list] [network] MAP kinase kinase kinase activity	(16 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2473 genes)	IEA

Protein

NP_001142924.1 [sequence] [blastp]
XP_020406986.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, mito 3, nucl 1, cyto_mito 1, mito_plas 1	(predict for NP_001142924.1)
chlo 6, mito 3, nucl 1, cyto_mito 1, mito_plas 1	(predict for XP_020406986.1)

Subcellular
localization
TargetP

mito 7, other 4	(predict for NP_001142924.1)
mito 7, other 4	(predict for XP_020406986.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100275358	zma-r.6 for 100275358	zma-u.5 for 100279294	zma-u.5 for 100272734	zma-u.5 for 100383481	sbi-r.1 for 8063264	sbi-r.1 for 8078939	sbi-r.1 for 8054301	osa-u.5 for 9271851	osa-u.5 for 4333845	osa-u.5 for 4330859	tae-r.2 for 123083936	tae-r.2 for 123085355	tae-r.2 for 123092689	hvu-r.1 for 123450189	hvu-r.1 for 123449095	hvu-r.1 for 123403898	bdi-r.1 for 100826299	bdi-r.1 for 100826357	bdi-r.1 for 100825446	ath-u.5 for MEKK3	ath-u.5 for MAPKKK9	ath-u.5 for MEKK1	gma-u.5 for 100820552	gma-u.5 for 100778553	gma-u.5 for 100798028	sly-u.5 for 101264342	sly-u.5 for 101263165	bra-r.6 for 103838792	bra-r.6 for 103858480	bra-r.6 for 103871108	vvi-u.5 for 100264591	vvi-u.5 for 100264291	ppo-u.5 for 7463181	ppo-u.5 for 7460930	mtr-u.5 for 25493333	mtr-u.5 for 11431495	mtr-u.5 for 11436045	ghi-r.1 for 107942035	ghi-r.1 for 107910263	ghi-r.1 for 107951438	bna-r.1 for 111213496	bna-r.1 for 106367654	bna-r.1 for 106345807	sot-r.1 for 102597910	sot-r.1 for 102593900	cit-r.1 for 102625693	cit-r.1 for 102609376	cit-r.1 for 102609173	nta-r.1 for 107795279	nta-r.1 for 107766395	nta-r.1 for 107806104

Ortholog

Ortholog ID: 1584

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

MEKK3

MAPKKK9

MEKK1

MEKK

Function^*

putative MAP kinase superfamily protein

uncharacterized LOC100272734

mitogen-activated protein kinase kinase kinase 1-like

G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520