ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100278273	uncharacterized LOC100278273
zma-r.6	100278273	uncharacterized LOC100278273
zma-u.5	103648954	uncharacterized LOC103648954
sbi-r.1	8056359	uncharacterized LOC8056359
osa-u.5	4343647	uncharacterized LOC4343647
tae-r.2	123188209	uncharacterized LOC123188209
tae-r.2	123052361	uncharacterized LOC123052361
tae-r.2	123044496	uncharacterized LOC123044496
hvu-r.1	123425646	uncharacterized LOC123425646
bdi-r.1	100842526	uncharacterized LOC100842526
ath-u.5	AT2G01870	uncharacterized protein
gma-u.5	100783048	uncharacterized LOC100783048
sly-u.5	101247982	uncharacterized LOC101247982
bra-r.6	103827545	uncharacterized LOC103827545
vvi-u.5	100854250	uncharacterized LOC100854250
ppo-u.5	7485749	uncharacterized LOC7485749
mtr-u.5	11443179	uncharacterized LOC11443179
ghi-r.1	107906696	uncharacterized LOC107906696
ghi-r.1	107959303	uncharacterized LOC107959303
bna-r.1	106411520	uncharacterized LOC106411520
bna-r.1	106431560	uncharacterized LOC106431560
cit-r.1	102630109	hypothetical protein
nta-r.1	107820539	uncharacterized LOC107820539

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0009535 [list] [network] chloroplast thylakoid membrane

(153 genes)

IEA

GO MF

Protein

NP_001145073.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 10

(predict for NP_001145073.2)

Subcellular
localization
TargetP

chlo 5, mito 5

(predict for NP_001145073.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100278273	zma-r.6 for 100278273	zma-u.5 for 103648954	sbi-r.1 for 8056359	osa-u.5 for 4343647	tae-r.2 for 123188209	tae-r.2 for 123052361	tae-r.2 for 123044496	hvu-r.1 for 123425646	bdi-r.1 for 100842526	ath-u.5 for AT2G01870	gma-u.5 for 100783048	sly-u.5 for 101247982	bra-r.6 for 103827545	vvi-u.5 for 100854250	ppo-u.5 for 7485749	mtr-u.5 for 11443179	ghi-r.1 for 107906696	ghi-r.1 for 107959303	bna-r.1 for 106411520	bna-r.1 for 106431560	cit-r.1 for 102630109	nta-r.1 for 107820539

Ortholog

Ortholog ID: 11646

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

cit

nta

Symbol

Function^*

uncharacterized LOC100278273

uncharacterized LOC103648954

uncharacterized LOC8056359

uncharacterized LOC4343647

uncharacterized LOC123188209

uncharacterized LOC123052361

uncharacterized LOC123044496

uncharacterized LOC123425646

uncharacterized LOC100842526

uncharacterized protein

uncharacterized LOC100783048

uncharacterized LOC101247982

uncharacterized LOC103827545

uncharacterized LOC100854250

uncharacterized LOC7485749

uncharacterized LOC11443179

uncharacterized LOC107906696

uncharacterized LOC107959303

uncharacterized LOC106411520

uncharacterized LOC106431560

hypothetical protein

uncharacterized LOC107820539

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00710	Carbon fixation by Calvin cycle	2
bdi01200	Carbon metabolism	2
bdi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00591	Linoleic acid metabolism	2
gma00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00195	Photosynthesis	8
ppo00196	Photosynthesis - antenna proteins	2
ppo00710	Carbon fixation by Calvin cycle	2
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00630	Glyoxylate and dicarboxylate metabolism	6
bna00020	Citrate cycle (TCA cycle)	4
bna00270	Cysteine and methionine metabolism	4
bna00566	Sulfoquinovose metabolism	4
bna00620	Pyruvate metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00020	Citrate cycle (TCA cycle)	4
bna00270	Cysteine and methionine metabolism	4
bna00566	Sulfoquinovose metabolism	4
bna00620	Pyruvate metabolism	4
bna00630	Glyoxylate and dicarboxylate metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	2
nta00620	Pyruvate metabolism	2
nta00630	Glyoxylate and dicarboxylate metabolism	2
nta00650	Butanoate metabolism	2
nta01200	Carbon metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100278273

103648954

8056359

4343647

123188209

123052361

123044496

123425646

100842526

814718

100783048

101247982

103827545

100854250

7485749

11443179

107906696

107959303

106411520

106431560

102630109

107820539

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100278273 (zma-u.5 coexpression data)

Top 50 enrichment test to 100278273 (zma-u.5 coexpression data)


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	cit	nta	sot	cre
Paralog	3	1	1	3	1	1	1	1	1	1	1	1	1	2	2	1	1	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100278273 (zma-u.5 coexpression data)

Top 50 enrichment test to 100278273 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**