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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100278811   RNase L inhibitor protein-related 
 zma-r.6   100278811   RNase L inhibitor protein-related 
 zma-m.5   100278811   RNase L inhibitor protein-related 
 sbi-r.1   8081892   ribosome biogenesis protein TSR3 homolog 
 osa-u.5   4331931   ribosome biogenesis protein TSR3 homolog 
 tae-r.2   123093136   18S rRNA aminocarboxypropyltransferase 
 tae-r.2   123084962   18S rRNA aminocarboxypropyltransferase 
 tae-r.2   123098413   18S rRNA aminocarboxypropyltransferase 
 hvu-r.1   123449442   18S rRNA aminocarboxypropyltransferase 
 bdi-r.1   100839443   ribosome biogenesis protein TSR3 homolog 
 ath-u.5   AT5G10070   RNase L inhibitor protein-like protein 
 gma-u.5   100801900   18S rRNA aminocarboxypropyltransferase 
 gma-u.5   100777863   18S rRNA aminocarboxypropyltransferase 
 sly-u.5   101268185   uncharacterized LOC101268185 
 bra-r.6   103846840   ribosome biogenesis protein TSR3 homolog 
 vvi-u.5   100247485   uncharacterized LOC100247485 
 ppo-u.5   7486321   uncharacterized LOC7486321 
 ppo-u.5   18100964   uncharacterized LOC18100964 
 mtr-u.5   11438385   18S rRNA aminocarboxypropyltransferase 
 ghi-r.1   107950387   18S rRNA aminocarboxypropyltransferase 
 ghi-r.1   107951673   18S rRNA aminocarboxypropyltransferase 
 bna-r.1   106419468   18S rRNA aminocarboxypropyltransferase-like 
 bna-r.1   106426714   18S rRNA aminocarboxypropyltransferase 
 sot-r.1   102606406   ribosome biogenesis protein TSR3 homolog 
 cit-r.1   102612199   uncharacterized LOC102612199 
 nta-r.1   107788182   uncharacterized LOC107788182 
 cre-r.1   CHLRE_17g698950v5   uncharacterized protein 

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Top 50 coexpressed genes to 100278811 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100278811 (zma-u.5 coexpression data)

CoexMap"100278811"


zmaLOC100278811 | Entrez gene ID : 100278811      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 3 1 1 1 2 1 1 1 2 1 2 2 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030490 [list] [network] maturation of SSU-rRNA  (56 genes)  IEA  
GO CC
GO MF
GO:0106388 [list] [network] rRNA small subunit aminocarboxypropyltransferase activity  (1 genes)  IEA  
Protein NP_001145437.2 [sequence] [blastp]
XP_008658456.1 [sequence] [blastp]
XP_008658457.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  mito 3,  cyto_mito 2,  chlo 1,  cysk 1  (predict for NP_001145437.2)
nucl 5,  mito 3,  cyto_mito 2,  chlo 1,  cysk 1  (predict for XP_008658456.1)
nucl 5,  mito 3,  cyto_mito 2,  chlo 1,  cysk 1  (predict for XP_008658457.1)
Subcellular
localization
TargetP
mito 6,  other 3  (predict for NP_001145437.2)
mito 6,  other 3  (predict for XP_008658456.1)
mito 6,  other 3  (predict for XP_008658457.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100278811
zma-r.6
for
100278811
zma-m.5
for
100278811
sbi-r.1
for
8081892
osa-u.5
for
4331931
tae-r.2
for
123093136
tae-r.2
for
123084962
tae-r.2
for
123098413
hvu-r.1
for
123449442
bdi-r.1
for
100839443
ath-u.5
for
AT5G10070
gma-u.5
for
100801900
gma-u.5
for
100777863
sly-u.5
for
101268185
bra-r.6
for
103846840
vvi-u.5
for
100247485
ppo-u.5
for
7486321
ppo-u.5
for
18100964
mtr-u.5
for
11438385
ghi-r.1
for
107950387
ghi-r.1
for
107951673
bna-r.1
for
106419468
bna-r.1
for
106426714
sot-r.1
for
102606406
cit-r.1
for
102612199
nta-r.1
for
107788182
cre-r.1
for
CHLRE_17g698950v5


Ortholog ID: 10286
Species zma sbi osa tae tae tae hvu bdi ath gma gma sly bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta cre
Symbol LOC100278811 LOC8081892 LOC4331931 LOC123093136 LOC123084962 LOC123098413 LOC123449442 LOC100839443 AT5G10070 LOC100801900 LOC100777863 LOC101268185 LOC103846840 LOC100247485 LOC7486321 LOC18100964 LOC11438385 LOC107950387 LOC107951673 LOC106419468 LOC106426714 LOC102606406 LOC102612199 LOC107788182 CHLRE_17g698950v5
Function* RNase L inhibitor protein-related ribosome biogenesis protein TSR3 homolog ribosome biogenesis protein TSR3 homolog 18S rRNA aminocarboxypropyltransferase 18S rRNA aminocarboxypropyltransferase 18S rRNA aminocarboxypropyltransferase 18S rRNA aminocarboxypropyltransferase ribosome biogenesis protein TSR3 homolog RNase L inhibitor protein-like protein 18S rRNA aminocarboxypropyltransferase 18S rRNA aminocarboxypropyltransferase uncharacterized LOC101268185 ribosome biogenesis protein TSR3 homolog uncharacterized LOC100247485 uncharacterized LOC7486321 uncharacterized LOC18100964 18S rRNA aminocarboxypropyltransferase 18S rRNA aminocarboxypropyltransferase 18S rRNA aminocarboxypropyltransferase 18S rRNA aminocarboxypropyltransferase-like 18S rRNA aminocarboxypropyltransferase ribosome biogenesis protein TSR3 homolog uncharacterized LOC102612199 uncharacterized LOC107788182 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
gma03040 Spliceosome 3
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 3
bra03040 Spliceosome 3
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100278811 8081892 4331931 123093136 123084962 123098413 123449442 100839443 830871 100801900 100777863 101268185 103846840 100247485 7486321 18100964 11438385 107950387 107951673 106419468 106426714 102606406 102612199 107788182 5717338
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