ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100278856	uncharacterized LOC100278856
zma-r.6	100278856	uncharacterized LOC100278856
sbi-r.1	8074574	uncharacterized LOC8074574
osa-u.5	4339575	uncharacterized LOC4339575
tae-r.2	123145103	uncharacterized LOC123145103
tae-r.2	123067536	uncharacterized LOC123067536
tae-r.2	123183022	uncharacterized LOC123183022
hvu-r.1	123449797	uncharacterized LOC123449797
bdi-r.1	100830727	uncharacterized LOC100830727
ath-u.5	AT3G15180	ARM repeat superfamily protein
gma-u.5	100785671	uncharacterized LOC100785671
gma-u.5	100782437	uncharacterized LOC100782437
sly-u.5	101261434	uncharacterized LOC101261434
bra-r.6	103869951	uncharacterized LOC103869951
vvi-u.5	100260719	uncharacterized LOC100260719
ppo-u.5	18095544	uncharacterized LOC18095544
mtr-u.5	11410998	uncharacterized LOC11410998
ghi-r.1	107948756	uncharacterized LOC107948756
ghi-r.1	107944083	uncharacterized LOC107944083
bna-r.1	BNAC05G38440D	uncharacterized BNAC05G38440D
bna-r.1	111215699	uncharacterized LOC111215699
sot-r.1	102597543	uncharacterized LOC102597543
cit-r.1	102617116	uncharacterized LOC102617116
nta-r.1	107815611	uncharacterized LOC107815611
nta-r.1	107760286	uncharacterized LOC107760286
cre-r.1	CHLRE_05g246300v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0043248 [list] [network] proteasome assembly

(13 genes)

IEA

GO CC

GO:0005829 [list] [network] cytosol

(983 genes)

IEA

GO MF

Protein

NP_001145467.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, nucl 3, chlo 2, vacu 1, cysk_nucl 1, nucl_plas 1

(predict for NP_001145467.2)

Subcellular
localization
TargetP

other 8

(predict for NP_001145467.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100278856	zma-r.6 for 100278856	sbi-r.1 for 8074574	osa-u.5 for 4339575	tae-r.2 for 123145103	tae-r.2 for 123067536	tae-r.2 for 123183022	hvu-r.1 for 123449797	bdi-r.1 for 100830727	ath-u.5 for AT3G15180	gma-u.5 for 100785671	gma-u.5 for 100782437	sly-u.5 for 101261434	bra-r.6 for 103869951	vvi-u.5 for 100260719	ppo-u.5 for 18095544	mtr-u.5 for 11410998	ghi-r.1 for 107948756	ghi-r.1 for 107944083	bna-r.1 for BNAC05G38440D	bna-r.1 for 111215699	sot-r.1 for 102597543	cit-r.1 for 102617116	nta-r.1 for 107815611	nta-r.1 for 107760286	cre-r.1 for CHLRE_05g246300v5

Ortholog

Ortholog ID: 10084

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC100278856

uncharacterized LOC8074574

uncharacterized LOC4339575

uncharacterized LOC123145103

uncharacterized LOC123067536

uncharacterized LOC123183022

uncharacterized LOC123449797

uncharacterized LOC100830727

ARM repeat superfamily protein

uncharacterized LOC100785671

uncharacterized LOC100782437

uncharacterized LOC101261434

uncharacterized LOC103869951

uncharacterized LOC100260719

uncharacterized LOC18095544

uncharacterized LOC11410998

uncharacterized LOC107948756

uncharacterized LOC107944083

uncharacterized BNAC05G38440D

uncharacterized LOC111215699

uncharacterized LOC102597543

uncharacterized LOC102617116

uncharacterized LOC107815611

uncharacterized LOC107760286

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00970	Aminoacyl-tRNA biosynthesis	10
zma00450	Selenocompound metabolism	2
zma00340	Histidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03020	RNA polymerase	2
sbi03420	Nucleotide excision repair	2
sbi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	4
tae00440	Phosphonate and phosphinate metabolism	3
tae00564	Glycerophospholipid metabolism	3
tae00565	Ether lipid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	4
tae00440	Phosphonate and phosphinate metabolism	3
tae00564	Glycerophospholipid metabolism	3
tae00565	Ether lipid metabolism	3
tae00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00440	Phosphonate and phosphinate metabolism	3
tae00564	Glycerophospholipid metabolism	3
tae00565	Ether lipid metabolism	3
tae04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	5
bdi03410	Base excision repair	3
bdi03030	DNA replication	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03050	Proteasome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00071	Fatty acid degradation	4
bra00410	beta-Alanine metabolism	3
bra00592	alpha-Linolenic acid metabolism	3
bra01040	Biosynthesis of unsaturated fatty acids	3
bra01212	Fatty acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	3
mtr03015	mRNA surveillance pathway	2
mtr03040	Spliceosome	2
mtr03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03460	Fanconi anemia pathway	2
ghi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
ghi01230	Biosynthesis of amino acids	2
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03460	Fanconi anemia pathway	2
ghi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
ghi01230	Biosynthesis of amino acids	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03050	Proteasome	5
bna03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03050	Proteasome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03050	Proteasome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2
nta03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03050	Proteasome	15

Expression

Expression pattern

Entrez Gene ID^*

100278856

8074574

4339575

123145103

123067536

123183022

123449797

100830727

820749

100785671

100782437

101261434

103869951

100260719

18095544

11410998

107948756

107944083

106401164

111215699

102597543

102617116

107815611

107760286

5726303

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100278856 (zma-u.5 coexpression data)

Top 50 enrichment test to 100278856 (zma-u.5 coexpression data)


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	1	1	3	1	1	1	2	1	1	1	1	1	2	2	1	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100278856 (zma-u.5 coexpression data)

Top 50 enrichment test to 100278856 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**