ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	100279015	uncharacterized LOC100279015
zma-r.6	100279015	uncharacterized LOC100279015
zma-u.5	109944085	hydrophobic protein LTI6A-like
zma-u.5	100281012	uncharacterized LOC100281012
zma-u.5	100281117	uncharacterized LOC100281117
sbi-r.1	110432819	hydrophobic protein LTI6A
sbi-r.1	8077254	hydrophobic protein OSR8
osa-u.5	4332481	low temperature-induced protein lt101.2
osa-u.5	4325147	hydrophobic protein LTI6B
tae-r.2	123186639	hydrophobic protein LTI6A
tae-r.2	123164807	low temperature-induced protein lt101.2
tae-r.2	123160508	hydrophobic protein RCI2A
hvu-r.1	123405939	low temperature-induced protein lt101.2-like
hvu-r.1	123407491	hydrophobic protein OSR8-like
bdi-r.1	100838178	hydrophobic protein LTI6B
ath-u.5	AT4G30660	Low temperature and salt responsive protein family
gma-u.5	100792684	hydrophobic protein RCI2B
gma-u.5	100815133	salt stress-induced hydrophobic peptide ESI3
sly-u.5	101247136	UPF0057 membrane protein At4g30660
bra-r.6	103852521	UPF0057 membrane protein At4g30660
bra-r.6	103850005	hydrophobic protein RCI2B
ppo-u.5	7465207	hydrophobic protein RCI2A
ppo-u.5	112327652	hydrophobic protein LTI6B-like
ppo-u.5	7457887	salt stress-induced hydrophobic peptide ESI3
mtr-u.5	11437571	UPF0057 membrane protein At4g30660
mtr-u.5	11433105	hydrophobic protein RCI2B
ghi-r.1	107893441	UPF0057 membrane protein At4g30660
ghi-r.1	107893498	hydrophobic protein RCI2B
sot-r.1	102605230	hydrophobic protein LTI6A
sot-r.1	102583169	UPF0057 membrane protein At4g30660
cit-r.1	102622890	salt stress-induced hydrophobic peptide ESI3
cit-r.1	102622068	hydrophobic protein RCI2B
cit-r.1	102621787	hydrophobic protein RCI2B
cre-r.1	CHLRE_03g197513v5	uncharacterized protein

Top 50 coexpressed genes to 100279015 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100279015 (zma-u.5 coexpression data)

CoexMap"100279015"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0016020 [list] [network] membrane

(3751 genes)

IEA

GO MF

Protein

XP_020395427.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 4, vacu 4, plas 1, cyto 1, E.R. 1, nucl_plas 1, golg_plas 1, cysk_plas 1, mito_plas 1, cyto_E.R. 1

(predict for XP_020395427.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_020395427.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100279015	zma-r.6 for 100279015	zma-u.5 for 109944085	zma-u.5 for 100281012	zma-u.5 for 100281117	sbi-r.1 for 110432819	sbi-r.1 for 8077254	osa-u.5 for 4332481	osa-u.5 for 4325147	tae-r.2 for 123186639	tae-r.2 for 123164807	tae-r.2 for 123160508	hvu-r.1 for 123405939	hvu-r.1 for 123407491	bdi-r.1 for 100838178	ath-u.5 for AT4G30660	gma-u.5 for 100792684	gma-u.5 for 100815133	sly-u.5 for 101247136	bra-r.6 for 103852521	bra-r.6 for 103850005	ppo-u.5 for 7465207	ppo-u.5 for 112327652	ppo-u.5 for 7457887	mtr-u.5 for 11437571	mtr-u.5 for 11433105	ghi-r.1 for 107893441	ghi-r.1 for 107893498	sot-r.1 for 102605230	sot-r.1 for 102583169	cit-r.1 for 102622890	cit-r.1 for 102622068	cit-r.1 for 102621787	cre-r.1 for CHLRE_03g197513v5

Ortholog

Ortholog ID: 299

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

ppo

mtr

ghi

bna

sot

cit

cre

Symbol

Function^*

hydrophobic protein LTI6A-like

uncharacterized LOC100281117

Hydrophobic protein RCI2B

hydrophobic protein LTI6A

low temperature-induced protein lt101.2

hydrophobic protein LTI6B

hydrophobic protein OSR8-like

hydrophobic protein LTI6A-like

formin-like protein 7

hydrophobic protein RCI2A

low temperature-induced protein lt101.2

salt stress-induced hydrophobic peptide ESI3

low temperature-induced protein lt101.2

hydrophobic protein OSR8-like

hydrophobic protein LTI6B

hydrophobic protein OSR8

Low temperature and salt responsive protein family

salt stress-induced hydrophobic peptide ESI3

low temperature induced protein 6B-like protein

hydrophobic protein RCI2B

UPF0057 membrane protein At4g30660

protein RARE-COLD-INDUCIBLE 2B-like

protein RARE-COLD-INDUCIBLE 2A-like

hydrophobic protein RCI2B

UPF0057 membrane protein At2g24040-like

salt stress-induced hydrophobic peptide ESI3

hydrophobic protein LTI6B

UPF0057 membrane protein At4g30660

hydrophobic protein RCI2B

UPF0057 membrane protein At4g30660

salt stress-induced hydrophobic peptide ESI3

UPF0057 membrane protein At4g30660

hydrophobic protein RCI2B-like

UPF0057 membrane protein At4g30650

UPF0057 membrane protein At4g30660

hydrophobic protein RCI2B

UPF0057 membrane protein At4g30660

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04517	IgSF CAM signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	5
zma04145	Phagosome	4
zma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	5
zma04016	MAPK signaling pathway - plant	3
zma04070	Phosphatidylinositol signaling system	3
zma04075	Plant hormone signal transduction	3
zma04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04626	Plant-pathogen interaction	2
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00062	Fatty acid elongation	2
osa04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	5
osa03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00561	Glycerolipid metabolism	3
tae00566	Sulfoquinovose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	4
bdi03060	Protein export	3
bdi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04142	Lysosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	2
gma00040	Pentose and glucuronate interconversions	2
gma00053	Ascorbate and aldarate metabolism	2
gma00561	Glycerolipid metabolism	2
gma00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	3
bra00520	Amino sugar and nucleotide sugar metabolism	3
bra01250	Biosynthesis of nucleotide sugars	3
bra01230	Biosynthesis of amino acids	2
bra00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	2
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	2
ppo04145	Phagosome	2
ppo00510	N-Glycan biosynthesis	2
ppo00513	Various types of N-glycan biosynthesis	2
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00100	Steroid biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	2
bna04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03060	Protein export	2
sot04141	Protein processing in endoplasmic reticulum	2
sot04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00564	Glycerophospholipid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04814	Motor proteins	5

Expression

Expression pattern

Entrez Gene ID^*

109944085

100281117

100303875

110432819

8084551

4325147

4340332

112938314

123042824

123168557

123116854

123446606

123446608

123451962

100838178

100825700

829189

829188

816938

100815133

100306281

100775235

101246835

101267065

101266765

103850005

103832337

7457887

18098449

7485253

11437571

11435302

25494284

107899432

107888421

106429212

106393646

102583169

102622068

102621787

102612753

66052967

The preparation time of this page was 0.1 [sec].


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	ppo	mtr	ghi	sot	cit	cre	bna	vvi	nta
Paralog	5	2	2	3	2	1	1	2	1	2	3	2	2	2	3	1	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100279015 (zma-u.5 coexpression data)

Top 50 enrichment test to 100279015 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**