ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	100281760	non-cyanogenic beta-glucosidase
zma-r.6	100281760	non-cyanogenic beta-glucosidase
zma-u.5	100284659	uncharacterized LOC100284659
zma-u.5	100381862	uncharacterized LOC100381862
zma-u.5	100274288	uncharacterized LOC100274288
osa-u.5	4324050	beta-glucosidase 1-like
osa-u.5	4347441	beta-glucosidase 30-like
osa-u.5	4333842	beta-glucosidase 8-like
ath-u.5	BGLU16	beta glucosidase 16
ath-u.5	BGLU47	beta-glucosidase 47
gma-u.5	100805263	beta-glucosidase 13
gma-u.5	100802780	cyanogenic beta-glucosidase
gma-u.5	100802250	cyanogenic beta-glucosidase
sly-u.5	543698	beta-mannosidase
sly-u.5	101246223	beta-glucosidase 44-like
sly-u.5	101251735	beta-glucosidase 42
vvi-u.5	100243556	uncharacterized LOC100243556
vvi-u.5	100264732	beta-glucosidase 13
ppo-u.5	112327281	beta-glucosidase 12
ppo-u.5	112323255	beta-glucosidase 12
mtr-u.5	11415428	beta-glucosidase 42
mtr-u.5	11416444	beta-glucosidase 42

Top 50 coexpressed genes to 100281760 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100281760 (zma-u.5 coexpression data)

CoexMap"100281760"

[Cytoscape]

Annotation

functional annotation

KEGG

zma00460 [list] [network] Cyanoamino acid metabolism (49 genes)

zma00500 [list] [network] Starch and sucrose metabolism (180 genes)

zma00999 [list] [network] Biosynthesis of various plant secondary metabolites (74 genes)

GO BP

GO:0005975 [list] [network] carbohydrate metabolic process

(898 genes)

IEA

GO CC

GO MF

GO:0008422 [list] [network] beta-glucosidase activity

(42 genes)

IEA

Protein

NP_001148152.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, mito 2

(predict for NP_001148152.2)

Subcellular
localization
TargetP

chlo 9

(predict for NP_001148152.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100281760	zma-r.6 for 100281760	zma-u.5 for 100284659	zma-u.5 for 100381862	zma-u.5 for 100274288	osa-u.5 for 4324050	osa-u.5 for 4347441	osa-u.5 for 4333842	ath-u.5 for BGLU16	ath-u.5 for BGLU47	gma-u.5 for 100805263	gma-u.5 for 100802780	gma-u.5 for 100802250	sly-u.5 for 543698	sly-u.5 for 101246223	sly-u.5 for 101251735	vvi-u.5 for 100243556	vvi-u.5 for 100264732	ppo-u.5 for 112327281	ppo-u.5 for 112323255	mtr-u.5 for 11415428	mtr-u.5 for 11416444

Ortholog

Ortholog ID: 13

Species

zma

sbi

osa

tae

hvu

bdi

gma

sly

vvi

ppo

mtr

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC100280071

Beta-glucosidase 11

4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase 2, chloroplastic

probable inactive beta-glucosidase 14

beta-glucosidase 16-like

beta-glucosidase 26

beta-glucosidase 7

beta-glucosidase 12-like

beta-glucosidase 28-like

beta-glucosidase 8

beta-glucosidase 26

cyanogenic beta-glucosidase

beta-glucosidase 46

beta-glucosidase 44-like

beta-glucosidase 18

beta-glucosidase 40

beta-glucosidase 18

beta-glucosidase 12

beta-glucosidase 18

beta-glucosidase 27-like

beta-glucosidase 16

beta-glucosidase 18-like

beta-glucosidase 40-like

beta-glucosidase 42

beta-glucosidase 40-like

beta-glucosidase 18-like

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00270	Cysteine and methionine metabolism	3
zma01230	Biosynthesis of amino acids	3
zma00670	One carbon pool by folate	3
zma01200	Carbon metabolism	3
zma00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00564	Glycerophospholipid metabolism	2
zma00565	Ether lipid metabolism	2
zma00590	Arachidonic acid metabolism	2
zma00591	Linoleic acid metabolism	2
zma00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00562	Inositol phosphate metabolism	2
sbi04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00460	Cyanoamino acid metabolism	3
sbi00562	Inositol phosphate metabolism	2
sbi04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	2
osa04016	MAPK signaling pathway - plant	2
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	6
tae00460	Cyanoamino acid metabolism	3
tae00999	Biosynthesis of various plant secondary metabolites	3
tae00740	Riboflavin metabolism	3
tae04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00460	Cyanoamino acid metabolism	8
tae00500	Starch and sucrose metabolism	8
tae00999	Biosynthesis of various plant secondary metabolites	8
tae00520	Amino sugar and nucleotide sugar metabolism	4
tae00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00460	Cyanoamino acid metabolism	3
bdi00500	Starch and sucrose metabolism	3
bdi00999	Biosynthesis of various plant secondary metabolites	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00280	Valine, leucine and isoleucine degradation	2
bdi00380	Tryptophan metabolism	2
bdi00561	Glycerolipid metabolism	2
bdi00520	Amino sugar and nucleotide sugar metabolism	2
bdi00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00460	Cyanoamino acid metabolism	9
gma00500	Starch and sucrose metabolism	9
gma00999	Biosynthesis of various plant secondary metabolites	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00100	Steroid biosynthesis	3
gma00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00500	Starch and sucrose metabolism	2
sly00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly02010	ABC transporters	3
sly00460	Cyanoamino acid metabolism	3
sly00500	Starch and sucrose metabolism	3
sly00999	Biosynthesis of various plant secondary metabolites	3
sly04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00460	Cyanoamino acid metabolism	2
vvi00500	Starch and sucrose metabolism	2
vvi00999	Biosynthesis of various plant secondary metabolites	2
vvi00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00460	Cyanoamino acid metabolism	2
ppo00500	Starch and sucrose metabolism	2
ppo00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00460	Cyanoamino acid metabolism	2
mtr00500	Starch and sucrose metabolism	2
mtr00999	Biosynthesis of various plant secondary metabolites	2
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00460	Cyanoamino acid metabolism	4
mtr01240	Biosynthesis of cofactors	4
mtr00500	Starch and sucrose metabolism	2
mtr00999	Biosynthesis of various plant secondary metabolites	2
mtr00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00460	Cyanoamino acid metabolism	3
bna00500	Starch and sucrose metabolism	3
bna00999	Biosynthesis of various plant secondary metabolites	3
bna00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
bna00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	8
bna00460	Cyanoamino acid metabolism	7
bna00999	Biosynthesis of various plant secondary metabolites	7
bna00561	Glycerolipid metabolism	2
bna00566	Sulfoquinovose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00500	Starch and sucrose metabolism	5
sot00460	Cyanoamino acid metabolism	3
sot00999	Biosynthesis of various plant secondary metabolites	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00460	Cyanoamino acid metabolism	2
nta00500	Starch and sucrose metabolism	2
nta00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00460	Cyanoamino acid metabolism	4
nta00500	Starch and sucrose metabolism	4
nta00430	Taurine and hypotaurine metabolism	2
nta00480	Glutathione metabolism	2
nta00590	Arachidonic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03030	DNA replication	4
cre03410	Base excision repair	3
cre03420	Nucleotide excision repair	2
cre03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00500	Starch and sucrose metabolism	3
cre00130	Ubiquinone and other terpenoid-quinone biosynthesis	3
cre01240	Biosynthesis of cofactors	3

Expression

Expression pattern

Entrez Gene ID^*

100280071

100502286

8084227

8058167

4336388

4336389

123051779

123095814

123430412

123412267

100830468

100833042

100776708

100811526

101246223

101257526

100247567

18095620

18108692

25487361

25487363

106437124

106403844

102588686

102597190

102622210

107798023

107832842

5726583

5728934

The preparation time of this page was 0.1 [sec].


Species	zma	osa	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	3	2	3	3	2	2	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100281760 (zma-u.5 coexpression data)

Top 50 enrichment test to 100281760 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**