ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	100281769	acyltransferase
zma-r.6	100281769	acyltransferase
zma-u.5	100501504	uncharacterized LOC100501504
zma-u.5	100286138	acyltransferase
zma-u.5	100281789	acyltransferase
osa-u.5	4348874	3-ketoacyl-CoA synthase 12
osa-u.5	4332981	3-ketoacyl-CoA synthase 12
osa-u.5	4331113	3-ketoacyl-CoA synthase 12
ath-u.5	KCS12	3-ketoacyl-CoA synthase 12
ath-u.5	KCS19	3-ketoacyl-CoA synthase 19
ath-u.5	KCS3	3-ketoacyl-CoA synthase 3
gma-u.5	102669768	3-ketoacyl-CoA synthase 19
gma-u.5	100810048	3-ketoacyl-CoA synthase 12
gma-u.5	100809149	3-ketoacyl-CoA synthase 12
sly-u.5	101260402	3-ketoacyl-CoA synthase 3
sly-u.5	101260109	3-ketoacyl-CoA synthase 3-like
vvi-u.5	100243402	3-ketoacyl-CoA synthase 21-like
vvi-u.5	100241584	3-ketoacyl-CoA synthase 12
ppo-u.5	7489279	3-ketoacyl-CoA synthase 12
mtr-u.5	11422156	3-ketoacyl-CoA synthase 12
mtr-u.5	25485741	3-ketoacyl-CoA synthase 19
mtr-u.5	11410175	3-ketoacyl-CoA synthase 12

Top 50 coexpressed genes to 100281769 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100281769 (zma-u.5 coexpression data)

CoexMap"100281769"

[Cytoscape]

Annotation

functional annotation

KEGG

zma00062 [list] [network] Fatty acid elongation (42 genes)

zma04626 [list] [network] Plant-pathogen interaction (264 genes)

GO BP

GO:0006633 [list] [network] fatty acid biosynthetic process

(101 genes)

IEA

GO CC

GO:0016020 [list] [network] membrane

(3751 genes)

IEA

GO MF

GO:0016747 [list] [network] acyltransferase activity, transferring groups other than amino-acyl groups

(419 genes)

IEA

Protein

NP_001148161.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, mito 4

(predict for NP_001148161.1)

Subcellular
localization
TargetP

other 9

(predict for NP_001148161.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100281769	zma-r.6 for 100281769	zma-u.5 for 100501504	zma-u.5 for 100286138	zma-u.5 for 100281789	osa-u.5 for 4348874	osa-u.5 for 4332981	osa-u.5 for 4331113	ath-u.5 for KCS12	ath-u.5 for KCS19	ath-u.5 for KCS3	gma-u.5 for 102669768	gma-u.5 for 100810048	gma-u.5 for 100809149	sly-u.5 for 101260402	sly-u.5 for 101260109	vvi-u.5 for 100243402	vvi-u.5 for 100241584	ppo-u.5 for 7489279	mtr-u.5 for 11422156	mtr-u.5 for 25485741	mtr-u.5 for 11410175

Ortholog

Ortholog ID: 1073

Species

zma

sbi

osa

tae

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

KCS12

KCS19

Function^*

uncharacterized LOC100501504

acyltransferase

3-ketoacyl-CoA synthase 12

3-ketoacyl-CoA synthase 19

3-ketoacyl-CoA synthase 12

3-ketoacyl-CoA synthase 19

3-ketoacyl-CoA synthase 3-like

3-ketoacyl-CoA synthase 3

3-ketoacyl-CoA synthase 12

3-ketoacyl-CoA synthase 21-like

3-ketoacyl-CoA synthase 12

3-ketoacyl-CoA synthase 3

3-ketoacyl-CoA synthase 19

3-ketoacyl-CoA synthase 12

3-ketoacyl-CoA synthase 19

3-ketoacyl-CoA synthase 3

3-ketoacyl-CoA synthase 3-like

3-ketoacyl-CoA synthase 12-like

3-ketoacyl-CoA synthase 19

3-ketoacyl-CoA synthase 3-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00062	Fatty acid elongation	2
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00062	Fatty acid elongation	3
zma04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	2
sbi00240	Pyrimidine metabolism	2
sbi01240	Biosynthesis of cofactors	2
sbi00062	Fatty acid elongation	2
sbi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00062	Fatty acid elongation	3
osa04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00062	Fatty acid elongation	3
osa04626	Plant-pathogen interaction	2
osa00073	Cutin, suberine and wax biosynthesis	2
osa04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00564	Glycerophospholipid metabolism	5
tae00565	Ether lipid metabolism	5
tae04144	Endocytosis	5
tae00062	Fatty acid elongation	3
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00062	Fatty acid elongation	3
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00062	Fatty acid elongation	3
bdi04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00062	Fatty acid elongation	4
bdi04626	Plant-pathogen interaction	4
bdi00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00062	Fatty acid elongation	5
ath04626	Plant-pathogen interaction	5
ath02010	ABC transporters	4
ath04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00062	Fatty acid elongation	2
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00073	Cutin, suberine and wax biosynthesis	2
gma00062	Fatty acid elongation	2
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00062	Fatty acid elongation	4
sly04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00062	Fatty acid elongation	5
sly04626	Plant-pathogen interaction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra02010	ABC transporters	5
bra00062	Fatty acid elongation	4
bra04626	Plant-pathogen interaction	4
bra04981	Folate transport and metabolism	3
bra00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00073	Cutin, suberine and wax biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00062	Fatty acid elongation	4
vvi04626	Plant-pathogen interaction	4
vvi02010	ABC transporters	3
vvi04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00073	Cutin, suberine and wax biosynthesis	3
ppo00062	Fatty acid elongation	2
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00062	Fatty acid elongation	4
mtr04626	Plant-pathogen interaction	4
mtr00073	Cutin, suberine and wax biosynthesis	2
mtr02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00062	Fatty acid elongation	2
ghi04626	Plant-pathogen interaction	2
ghi00561	Glycerolipid metabolism	2
ghi00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00062	Fatty acid elongation	5
ghi04626	Plant-pathogen interaction	5
ghi00073	Cutin, suberine and wax biosynthesis	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00062	Fatty acid elongation	3
bna04626	Plant-pathogen interaction	3
bna04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00062	Fatty acid elongation	4
bna04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00062	Fatty acid elongation	4
sot04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00062	Fatty acid elongation	3
sot04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00062	Fatty acid elongation	4
cit04626	Plant-pathogen interaction	4
cit02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00940	Phenylpropanoid biosynthesis	2
cit00941	Flavonoid biosynthesis	2
cit00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00062	Fatty acid elongation	6
nta04626	Plant-pathogen interaction	6
nta02010	ABC transporters	2
nta04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00062	Fatty acid elongation	6
nta04626	Plant-pathogen interaction	6
nta02010	ABC transporters	2
nta04981	Folate transport and metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100501504

100281769

8067433

8080750

4331113

4332981

123180032

123139638

100831069

100836571

817412

830332

100810048

100777403

101260109

101260402

103836419

103871521

100241584

100243402

7485729

11410176

25485741

107932934

107959078

106422802

106415649

102593322

102593970

102617526

102616815

107820112

107826268

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Species	zma	osa	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	3	3	3	2	2	1	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100281769 (zma-u.5 coexpression data)

Top 50 enrichment test to 100281769 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**