Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100281791   chlorophyll a-b binding protein 6A 
 zma-r.6   100281791   chlorophyll a-b binding protein 6A 
 zma-m.5   100281791   chlorophyll a-b binding protein 6A 
 zma-u.5   100283212   chlorophyll a-b binding protein 6A 
 osa-u.5   4340892   chlorophyll a-b binding protein 1B-21, chloroplastic 
 ath-u.5   LHCA1   chlorophyll a-b binding protein 6 
 gma-u.5   100800350   chlorophyll a-b binding protein 6A, chloroplastic 
 gma-u.5   100305992   chlorophyll a-b binding protein 6, chloroplastic-like 
 sly-u.5   CAB6A   chlorophyll a/b binding protein precursor 
 sly-u.5   101253380   chlorophyll a-b binding protein 6A, chloroplastic 
 vvi-u.5   100263275   chlorophyll a-b binding protein 6A, chloroplastic-like 
 ppo-u.5   7458654   chlorophyll a-b binding protein 6, chloroplastic 
 ppo-u.5   7457873   chlorophyll a-b binding protein 6, chloroplastic 
 mtr-u.5   25495910   chlorophyll a-b binding protein 6, chloroplastic 

close


Top 50 coexpressed genes to 100281791 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100281791 (zma-u.5 coexpression data)

CoexMap"100281791"


zmaLOC100281791 | Entrez gene ID : 100281791      
Species zma osa ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 1 2 2 1 2 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma00196 [list] [network] Photosynthesis - antenna proteins (27 genes)
GO BP
GO:0009765 [list] [network] photosynthesis, light harvesting  (33 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (3751 genes)  IEA  
GO MF
Protein NP_001148183.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  vacu 3  (predict for NP_001148183.1)
Subcellular
localization
TargetP
chlo 6,  mito 3  (predict for NP_001148183.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100281791

.
zma-r.6
for
100281791

.
zma-m.5
for
100281791

.
zma-u.5
for
100283212

.
osa-u.5
for
4340892

.
ath-u.5
for
LHCA1

.
gma-u.5
for
100800350

.
gma-u.5
for
100305992

.
sly-u.5
for
CAB6A

.
sly-u.5
for
101253380

.
vvi-u.5
for
100263275

.
ppo-u.5
for
7458654

.
ppo-u.5
for
7457873

.
mtr-u.5
for
25495910

.


Ortholog ID: 5778
Species ath gma gma sly sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol LHCA1 LOC100305992 LOC100800350 LOC101253380 CAB6A LOC4340892 LOC100283212 LOC100281791 LOC103841392 LOC103829997 LOC100263275 LOC7457873 LOC7458654 LOC25495910 LOC100415887 LOC123164655 LOC123410658 LOC107913474 LOC107918660 LOC106410281 LOC106415221 CHLRE_06g283050v5 LOC8077179 LOC102587257 LOC102586581 LOC102629975 LOC100838367 LOC107810310 LOC107815759
Function* chlorophyll a-b binding protein 6 chlorophyll a-b binding protein 6, chloroplastic-like chlorophyll a-b binding protein 6A, chloroplastic chlorophyll a-b binding protein 6A, chloroplastic chlorophyll a/b binding protein precursor chlorophyll a-b binding protein 1B-21, chloroplastic chlorophyll a-b binding protein 6A chlorophyll a-b binding protein 6A chlorophyll a-b binding protein 6, chloroplastic chlorophyll a-b binding protein 6, chloroplastic chlorophyll a-b binding protein 6A, chloroplastic-like chlorophyll a-b binding protein 6, chloroplastic chlorophyll a-b binding protein 6, chloroplastic chlorophyll a-b binding protein 6, chloroplastic chlorophyll a-b binding protein 1B-21, chloroplastic chlorophyll a-b binding protein 1B-21, chloroplastic chlorophyll a-b binding protein 1B-21, chloroplastic chlorophyll a-b binding protein 6, chloroplastic chlorophyll a-b binding protein 6, chloroplastic chlorophyll a-b binding protein 6, chloroplastic chlorophyll a-b binding protein 6, chloroplastic uncharacterized protein chlorophyll a-b binding protein 1B-21, chloroplastic chlorophyll a-b binding protein 6A, chloroplastic-like chlorophyll a-b binding protein 6A, chloroplastic chlorophyll a-b binding protein 6, chloroplastic chlorophyll a-b binding protein 1B-21, chloroplastic chlorophyll a-b binding protein 6A, chloroplastic chlorophyll a-b binding protein 6A, chloroplastic
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00196 Photosynthesis - antenna proteins 13
ath00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 13
gma00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 11
gma00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00196 Photosynthesis - antenna proteins 14
sly00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00196 Photosynthesis - antenna proteins 15
sly00195 Photosynthesis 2
sly00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00196 Photosynthesis - antenna proteins 10
osa00195 Photosynthesis 6
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00196 Photosynthesis - antenna proteins 15
zma00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00196 Photosynthesis - antenna proteins 16
zma00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00196 Photosynthesis - antenna proteins 13
bra00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00196 Photosynthesis - antenna proteins 11
bra00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00196 Photosynthesis - antenna proteins 9
vvi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 4
ppo00710 Carbon fixation by Calvin cycle 3
ppo01230 Biosynthesis of amino acids 3
ppo00630 Glyoxylate and dicarboxylate metabolism 2
ppo00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00196 Photosynthesis - antenna proteins 10
ppo00195 Photosynthesis 3
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 9
mtr00196 Photosynthesis - antenna proteins 8
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 16
tae00860 Porphyrin metabolism 2
tae00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 12
tae00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00196 Photosynthesis - antenna proteins 11
hvu00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00196 Photosynthesis - antenna proteins 9
ghi00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00196 Photosynthesis - antenna proteins 9
ghi00601 Glycosphingolipid biosynthesis - lacto and neolacto series 4
ghi00603 Glycosphingolipid biosynthesis - globo and isoglobo series 4
ghi00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00196 Photosynthesis - antenna proteins 9
cre00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 13
sbi00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00196 Photosynthesis - antenna proteins 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00196 Photosynthesis - antenna proteins 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00196 Photosynthesis - antenna proteins 8
cit00195 Photosynthesis 7
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00196 Photosynthesis - antenna proteins 10
bdi00195 Photosynthesis 5
bdi00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00196 Photosynthesis - antenna proteins 6
nta00195 Photosynthesis 3
nta01240 Biosynthesis of cofactors 3
nta00061 Fatty acid biosynthesis 2
nta00780 Biotin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824654 100305992 100800350 101253380 544310 4340892 100283212 100281791 103841392 103829997 100263275 7457873 7458654 25495910 100415887 123164655 123410658 107913474 107918660 106410281 106415221 5720955 8077179 102587257 102586581 102629975 100838367 107810310 107815759
The preparation time of this page was 0.1 [sec].