ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	100281817	endochitinase A-like
zma-r.6	100281817	endochitinase A-like
zma-u.5	100284387	endochitinase PR4
zma-u.5	100283208	uncharacterized LOC100283208
zma-u.5	100384000	Endochitinase EP3
sbi-r.1	8060192	endochitinase A
sbi-r.1	8056503	chitinase 6
sbi-r.1	8060191	endochitinase A
osa-u.5	4336263	chitinase 4-like
osa-u.5	4329920	chitinase 6-like
tae-r.2	543494	agglutinin isolectin 2-like
tae-r.2	123095827	agglutinin isolectin 3-like
tae-r.2	123170176	agglutinin isolectin 3-like
hvu-r.1	123427105	chitinase 5-like
hvu-r.1	123427107	chitinase 4-like
hvu-r.1	123430460	chitinase 5-like
bdi-r.1	100836367	agglutinin isolectin 3
bdi-r.1	100836672	agglutinin isolectin 3
ath-u.5	AT3G47540	Chitinase family protein
ath-u.5	EP3	homolog of carrot EP3-3 chitinase
gma-u.5	100799642	endochitinase
gma-u.5	100779462	endochitinase A
gma-u.5	100776582	endochitinase PR4
sly-u.5	101243897	endochitinase PR4-like
sly-u.5	101256086	endochitinase EP3
bra-r.6	103841355	endochitinase EP3
bra-r.6	103867366	endochitinase At2g43590
bra-r.6	103858080	basic endochitinase CHB4
vvi-u.5	100244031	endochitinase EP3
vvi-u.5	100257850	endochitinase PR4
ppo-u.5	7467473	endochitinase EP3
ppo-u.5	7466811	endochitinase WIN8
ppo-u.5	7497095	endochitinase PR4
mtr-u.5	11435251	endochitinase PR4
mtr-u.5	25487916	endochitinase PR4
ghi-r.1	107957194	endochitinase EP3
ghi-r.1	107957193	endochitinase EP3
ghi-r.1	107890561	endochitinase EP3
bna-r.1	125603597	endochitinase At2g43590-like
bna-r.1	125609313	endochitinase At2g43590-like
sot-r.1	102583127	endochitinase EP3
sot-r.1	102583535	endochitinase PR4-like
cit-r.1	112495548	chitinase 4-like
cit-r.1	CHI1	chitinase CHI1
cit-r.1	102607842	endochitinase EP3-like
nta-r.1	107831802	endochitinase EP3-like
nta-r.1	107777898	chitinase 4-like

Top 50 coexpressed genes to 100281817 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100281817 (zma-u.5 coexpression data)

CoexMap""

[Cytoscape]

Annotation

functional annotation

Function

endochitinase A-like

KEGG

zma00520 [list] [network] Amino sugar and nucleotide sugar metabolism (159 genes)

GO BP

GO:0016998 [list] [network] cell wall macromolecule catabolic process	(17 genes)	IEA
GO:0006032 [list] [network] chitin catabolic process	(19 genes)	IEA
GO:0005975 [list] [network] carbohydrate metabolic process	(898 genes)	IEA

GO CC

GO MF

GO:0004568 [list] [network] chitinase activity

(32 genes)

IEA

Protein

XP_020403302.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 5, chlo 2, cyto 1, nucl 1, plas 1, nucl_plas 1, cyto_pero 1, cyto_E.R. 1

(predict for XP_020403302.1)

Subcellular
localization
TargetP

other 8, mito 5

(predict for XP_020403302.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100281817	zma-r.6 for 100281817	zma-u.5 for 100284387	zma-u.5 for 100283208	zma-u.5 for 100384000	sbi-r.1 for 8060192	sbi-r.1 for 8056503	sbi-r.1 for 8060191	osa-u.5 for 4336263	osa-u.5 for 4329920	tae-r.2 for 543494	tae-r.2 for 123095827	tae-r.2 for 123170176	hvu-r.1 for 123427105	hvu-r.1 for 123427107	hvu-r.1 for 123430460	bdi-r.1 for 100836367	bdi-r.1 for 100836672	ath-u.5 for AT3G47540	ath-u.5 for EP3	gma-u.5 for 100799642	gma-u.5 for 100779462	gma-u.5 for 100776582	sly-u.5 for 101243897	sly-u.5 for 101256086	bra-r.6 for 103841355	bra-r.6 for 103867366	bra-r.6 for 103858080	vvi-u.5 for 100244031	vvi-u.5 for 100257850	ppo-u.5 for 7467473	ppo-u.5 for 7466811	ppo-u.5 for 7497095	mtr-u.5 for 11435251	mtr-u.5 for 25487916	ghi-r.1 for 107957194	ghi-r.1 for 107957193	ghi-r.1 for 107890561	bna-r.1 for 125603597	bna-r.1 for 125609313	sot-r.1 for 102583127	sot-r.1 for 102583535	cit-r.1 for 112495548	cit-r.1 for CHI1	cit-r.1 for 102607842	nta-r.1 for 107831802	nta-r.1 for 107777898

Please wait a moment.

Ortholog

Ortholog ID: 512

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

EP3

CHI1

Function^*

uncharacterized LOC100283208

Endochitinase EP3

Endochitinase B

endochitinase A

chitinase 4-like

chitinase 5-like

agglutinin isolectin 2-like

chitinase 5

root-specific lectin-like

chitinase 5-like

chitinase 4-like

chitinase 5-like

agglutinin isolectin 3

chitinase 6

homolog of carrot EP3-3 chitinase

Chitinase family protein

endochitinase PR4

endochitinase PR4-like

endochitinase EP3

basic endochitinase CHB4

endochitinase At2g43580

endochitinase EP3

endochitinase PR4

chitinase 5-like

endochitinase WIN8

basic endochitinase CHB4

endochitinase EP3

endochitinase PR4

endochitinase EP3

endochitinase At2g43590-like

endochitinase At2g43610

endochitinase EP3

endochitinase PR4-like

chitinase CHI1

endochitinase EP3-like

chitinase 4-like

endochitinase EP3-like

endochitinase EP3

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00520	Amino sugar and nucleotide sugar metabolism	2
zma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00520	Amino sugar and nucleotide sugar metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00520	Amino sugar and nucleotide sugar metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00520	Amino sugar and nucleotide sugar metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04626	Plant-pathogen interaction	3
osa00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00520	Amino sugar and nucleotide sugar metabolism	4
osa04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00520	Amino sugar and nucleotide sugar metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00520	Amino sugar and nucleotide sugar metabolism	4
hvu04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	4
ath00520	Amino sugar and nucleotide sugar metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00520	Amino sugar and nucleotide sugar metabolism	4
gma00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00062	Fatty acid elongation	2
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00940	Phenylpropanoid biosynthesis	3
sly00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00480	Glutathione metabolism	8
vvi00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	3
vvi04626	Plant-pathogen interaction	2
vvi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	2
ppo04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00520	Amino sugar and nucleotide sugar metabolism	4
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00592	alpha-Linolenic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00520	Amino sugar and nucleotide sugar metabolism	6
cit04626	Plant-pathogen interaction	2
cit00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00061	Fatty acid biosynthesis	3
cit01040	Biosynthesis of unsaturated fatty acids	3
cit01212	Fatty acid metabolism	3
cit00520	Amino sugar and nucleotide sugar metabolism	2
cit00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00520	Amino sugar and nucleotide sugar metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	3
nta00010	Glycolysis / Gluconeogenesis	2
nta00020	Citrate cycle (TCA cycle)	2
nta00270	Cysteine and methionine metabolism	2
nta00566	Sulfoquinovose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	3
nta04016	MAPK signaling pathway - plant	2
nta04070	Phosphatidylinositol signaling system	2
nta04075	Plant hormone signal transduction	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	3
nta00010	Glycolysis / Gluconeogenesis	2
nta00020	Citrate cycle (TCA cycle)	2
nta00270	Cysteine and methionine metabolism	2
nta00566	Sulfoquinovose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100283208

100384000

100216890

8060192

8060191

8060193

4336263

4336265

543494

543492

123095816

123427105

123427107

123430460

100836367

100836672

100842264

824608

818961

100776582

100778526

101243897

101256086

103841355

103847766

103858079

100244031

100257850

100252703

7466811

7498090

18108499

11435251

25487916

107890557

121206305

107890558

125603597

106385920

102583127

102583535

102578024

102610864

127901463

107777898

107778881

107760646

The preparation time of this page was 0.5 [sec].


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	5	3	2	3	3	2	2	3	2	3	2	3	2	3	2	2	3	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100281817 (zma-u.5 coexpression data)

Top 50 enrichment test to 100281817 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**