ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	100282234	1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1
zma-r.6	100282234	1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1
zma-m.5	100282234	1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1
zma-u.5	732844	phospholipid synthesis 1
osa-u.5	4350987	1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1
ath-u.5	LPAT2	lysophosphatidyl acyltransferase 2
gma-u.5	100812696	1-acyl-sn-glycerol-3-phosphate acyltransferase 2
gma-u.5	100805704	1-acyl-sn-glycerol-3-phosphate acyltransferase 2
gma-u.5	100792858	1-acyl-sn-glycerol-3-phosphate acyltransferase 2
sly-u.5	101249615	1-acyl-sn-glycerol-3-phosphate acyltransferase 2
sly-u.5	101261177	1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like
vvi-u.5	100262467	1-acyl-sn-glycerol-3-phosphate acyltransferase 2
ppo-u.5	7484004	1-acyl-sn-glycerol-3-phosphate acyltransferase 2
ppo-u.5	7480052	1-acyl-sn-glycerol-3-phosphate acyltransferase 3
mtr-u.5	25483419	1-acyl-sn-glycerol-3-phosphate acyltransferase 2
mtr-u.5	11434736	1-acyl-sn-glycerol-3-phosphate acyltransferase 3
mtr-u.5	11444743	1-acyl-sn-glycerol-3-phosphate acyltransferase 2

Top 50 coexpressed genes to 100282234 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100282234 (zma-u.5 coexpression data)

CoexMap"100282234"

[Cytoscape]

Annotation

functional annotation

KEGG

zma00561 [list] [network] Glycerolipid metabolism (95 genes)

zma00564 [list] [network] Glycerophospholipid metabolism (130 genes)

GO BP

GO CC

GO:0012505 [list] [network] endomembrane system

(1363 genes)

IEA

GO MF

GO:0003841 [list] [network] 1-acylglycerol-3-phosphate O-acyltransferase activity

(3 genes)

IEA

Protein

NP_001148618.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, nucl 1, extr 1, E.R. 1, golg 1

(predict for NP_001148618.2)

Subcellular
localization
TargetP

scret 9

(predict for NP_001148618.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100282234	zma-r.6 for 100282234	zma-m.5 for 100282234	zma-u.5 for 732844	osa-u.5 for 4350987	ath-u.5 for LPAT2	gma-u.5 for 100812696	gma-u.5 for 100805704	gma-u.5 for 100792858	sly-u.5 for 101249615	sly-u.5 for 101261177	vvi-u.5 for 100262467	ppo-u.5 for 7484004	ppo-u.5 for 7480052	mtr-u.5 for 25483419	mtr-u.5 for 11434736	mtr-u.5 for 11444743

Ortholog

Ortholog ID: 3239

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

LPAT2

Function^*

1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1

phospholipid synthesis 1

1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1

lysophosphatidyl acyltransferase 2

1-acyl-sn-glycerol-3-phosphate acyltransferase 2

1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like

1-acyl-sn-glycerol-3-phosphate acyltransferase 2

1-acyl-sn-glycerol-3-phosphate acyltransferase 3-like

1-acyl-sn-glycerol-3-phosphate acyltransferase 3

1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like

1-acyl-sn-glycerol-3-phosphate acyltransferase 2

1-acyl-sn-glycerol-3-phosphate acyltransferase 3

1-acyl-sn-glycerol-3-phosphate acyltransferase 2

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03015	mRNA surveillance pathway	2
zma04136	Autophagy - other	2
zma04382	Cornified envelope formation	2
zma00561	Glycerolipid metabolism	2
zma00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00564	Glycerophospholipid metabolism	3
zma00561	Glycerolipid metabolism	2
zma00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03050	Proteasome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	4
osa03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	5
tae00561	Glycerolipid metabolism	3
tae00564	Glycerophospholipid metabolism	3
tae04145	Phagosome	3
tae03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	5
tae00561	Glycerolipid metabolism	3
tae00564	Glycerophospholipid metabolism	3
tae04145	Phagosome	3
tae03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	3
hvu04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00630	Glyoxylate and dicarboxylate metabolism	2
bdi01200	Carbon metabolism	2
bdi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	3
bdi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	5
ath00510	N-Glycan biosynthesis	4
ath00513	Various types of N-glycan biosynthesis	4
ath04144	Endocytosis	2
ath05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	2
gma00561	Glycerolipid metabolism	2
gma00564	Glycerophospholipid metabolism	2
gma00062	Fatty acid elongation	2
gma01040	Biosynthesis of unsaturated fatty acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00561	Glycerolipid metabolism	2
gma00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00260	Glycine, serine and threonine metabolism	2
sly00630	Glyoxylate and dicarboxylate metabolism	2
sly01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00561	Glycerolipid metabolism	2
bra00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00561	Glycerolipid metabolism	2
bra00564	Glycerophospholipid metabolism	2
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04144	Endocytosis	2
vvi04142	Lysosome	2
vvi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00561	Glycerolipid metabolism	2
ppo00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00062	Fatty acid elongation	4
ppo01040	Biosynthesis of unsaturated fatty acids	4
ppo01212	Fatty acid metabolism	4
ppo00561	Glycerolipid metabolism	2
ppo00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	3
mtr01212	Fatty acid metabolism	3
mtr00062	Fatty acid elongation	3
mtr01040	Biosynthesis of unsaturated fatty acids	2
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04146	Peroxisome	2
mtr00071	Fatty acid degradation	2
mtr01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00561	Glycerolipid metabolism	6
ghi01240	Biosynthesis of cofactors	6
ghi00010	Glycolysis / Gluconeogenesis	4
ghi00280	Valine, leucine and isoleucine degradation	4
ghi00310	Lysine degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00910	Nitrogen metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00561	Glycerolipid metabolism	3
bna00564	Glycerophospholipid metabolism	3
bna04814	Motor proteins	2
bna04517	IgSF CAM signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00561	Glycerolipid metabolism	3
bna00564	Glycerophospholipid metabolism	3
bna04814	Motor proteins	2
bna04517	IgSF CAM signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00860	Porphyrin metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03420	Nucleotide excision repair	2
sot04141	Protein processing in endoplasmic reticulum	2
sot04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	2
cit04712	Circadian rhythm - plant	2
cit01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	6
nta04136	Autophagy - other	6
nta04382	Cornified envelope formation	6
nta04626	Plant-pathogen interaction	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	6
nta04136	Autophagy - other	6
nta04382	Cornified envelope formation	6
nta04626	Plant-pathogen interaction	2
nta04144	Endocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

100282234

732844

8067213

8068336

4350987

123119882

123110863

123451990

100846237

100825849

824934

100792858

100814107

101249615

101261177

103830115

103841671

100262467

7485457

7484004

11444743

25483419

121214006

121220165

125586961

125609525

102584519

102591458

102623515

102625993

107815233

107814856

The preparation time of this page was 0.1 [sec].


Species	zma	osa	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	1	1	3	2	1	2	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100282234 (zma-u.5 coexpression data)

Top 50 enrichment test to 100282234 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**